RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 CHST14Q8NCH0 376 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 ZNF740Q8NDX6 193 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 SUN3Q8TAQ9 357 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 TRMT10AQ8TBZ6 339 aaKnown RBP6.97□□□□□ -1.29
C11orf54-202ENST00000354421 SFXN5Q8TD22 340 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 XAGE5Q8WWM1 108 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 DIO2Q92813 273 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 ZNF689Q96CS4 500 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-202ENST00000354421 TIMP4Q99727 224 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 FAIM2Q9BWQ8 316 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 MS4A8Q9BY19 250 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 MRPL9Q9BYD2 267 aaKnown RBP6.97□□□□□ -1.29
C11orf54-202ENST00000354421 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-202ENST00000354421 SHARPINQ9H0F6 387 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 ZCCHC4Q9H5U6 513 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 DDX31Q9H8H2 851 aaKnown RBP6.97□□□□□ -1.29
C11orf54-202ENST00000354421 PELI2Q9HAT8 420 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 INPP5EQ9NRR6 644 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 ADAM29Q9UKF5 820 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 CAMK2AQ9UQM7 478 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 TMEM5Q9Y2B1 443 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 NPFFR2Q9Y5X5 522 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 KCNMB2Q9Y691 235 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 DOCK6Q96HP0 2047 aa6.97□□□□□ -1.29
C11orf54-202ENST00000354421 NUP210Q8TEM1 1887 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-202ENST00000354421 FAM221BA6H8Z2 402 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SLC9B1P1A6NJY1 282 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 LRRN3E7EW58 273 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ATP6V1G2-DDX39BF2Z307 99 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 M0R233 179 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SOCS6O14544 535 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 GRM6O15303 877 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 NDUFA2O43678 99 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TGM6O95932 706 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TBX6O95947 436 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 GNSP15586 552 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 PBLDP30039 288 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SSTR2P30874 369 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SRP9P49458 86 aaKnown RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 BLVRAP53004 296 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TAS2R43P59537 309 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 RPS7P62081 194 aaKnown RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 CTAG1AP78358 180 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 DGCR2P98153 550 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 CRYZQ08257 329 aaKnown RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 FUT5Q11128 374 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ST3GAL3Q11203 375 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TMEM115Q12893 351 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 NHLRC3Q5JS37 347 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 LRRC73Q5JTD7 316 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 PRAMEF14Q5SWL7 426 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 PRAMEF13Q5VWM6 474 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 RGS7BPQ6MZT1 257 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TFAP2EQ6VUC0 442 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ZNF620Q6ZNG0 422 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 PXKQ7Z7A4 578 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 NPAS4Q8IUM7 802 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 NRSN1Q8IZ57 195 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 BMPERQ8N8U9 685 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 PCSK9Q8NBP7 692 aaKnown RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 BBS1Q8NFJ9 593 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ZNF461Q8TAF7 563 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 CXorf40AQ8TE69 158 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 GIMAP1Q8WWP7 306 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SUSD6Q92537 303 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 COQ10AQ96MF6 247 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 CMTM3Q96MX0 182 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 RBCK1Q9BYM8 510 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ABCG4Q9H172 646 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 LRRN3Q9H3W5 708 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 FN3KQ9H479 309 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 KCNK12Q9HB15 430 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 PLEKHA1Q9HB21 404 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ZNF334Q9HCZ1 680 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 HINT3Q9NQE9 182 aaKnown RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 NANSQ9NR45 359 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SEMA4GQ9NTN9 838 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TDP1Q9NUW8 608 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 RDH8Q9NYR8 311 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 COQ3Q9NZJ6 369 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 H2AFY2Q9P0M6 372 aaPredicted RBP6.96□□□□□ -1.29
C11orf54-202ENST00000354421 ABRACLQ9P1F3 81 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TRPC4Q9UBN4 977 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 RPS6KB2Q9UBS0 482 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SLC25A13Q9UJS0 675 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 SCML1Q9UN30 329 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.29
C11orf54-202ENST00000354421 TRAV1-2A0A0B4J238 106 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 A0A1W2PRG6 482 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 A8MUA0 341 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 KRBOX1C9JBD0 128 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 ZNF749O43361 778 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 PLPP2O43688 288 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 TMEM127O75204 238 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 SC5DO75845 299 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 WDPCPO95876 746 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 SYPP08247 313 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 CD3GP09693 182 aa6.96□□□□□ -1.3
C11orf54-202ENST00000354421 SAGP10523 405 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms