RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CYB5AP00167 134 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 PLGP00747 810 aaPredicted RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FPR3P25089 353 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 MXD1Q05195 221 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ALG10Q5BKT4 473 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ATAD3CQ5T2N8 411 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FAM205BPQ63HN1 556 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 KDM4DQ6B0I6 523 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 GALNT11Q8NCW6 608 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 MORN4Q8NDC4 146 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF350Q9GZX5 532 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CLEC1BQ9P126 229 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 UPB1Q9UBR1 384 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 A0A1B0GTL3 188 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 DISC1C4P0D8 188 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ACOT7O00154 380 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ETHE1O95571 254 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CTXN1P60606 82 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 Q6ZS52 159 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 NSMAFQ92636 917 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 MED30Q96HR3 178 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 TSNAXQ99598 290 aaKnown RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 DPH1Q9BZG8 443 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 USP22Q9UPT9 525 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CMAHPQ9Y471 501 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 HCRTR1O43613 425 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 RLN1P04808 185 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 MAP2K4P45985 399 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OR1D4P47884 311 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 DAPP51397 102 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 WNT4P56705 351 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 CD300CQ08708 224 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 E2F2Q14209 437 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 GFOD2Q3B7J2 385 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 TMEM71Q6P5X7 295 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 IGFN1Q86VF2 1251 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF227Q86WZ6 799 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF615Q8N8J6 731 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OR52E2Q8NGJ4 325 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OR6N2Q8NGY6 317 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 LGALS12Q96DT0 336 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 C11orf24Q96F05 449 aaPredicted RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 HIST1H2AAQ96QV6 131 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OR6C1Q96RD1 312 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 MROQ9BYG7 248 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ELL3Q9HB65 397 aaPredicted RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 GMPR2Q9P2T1 348 aaKnown RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 HMGN4O00479 90 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 FLRT2O43155 660 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 PIAS2O75928 621 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 DCNP07585 359 aaKnown RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 PEPDP12955 493 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ST6GAL1P15907 406 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 GIPRP48546 466 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 FAM76BQ5HYJ3 339 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 TRBV11-1A0A0K0K1C0 115 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 DLGAP1O14490 977 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 S1PR1P21453 382 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 S100GP29377 79 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OTX2P32243 289 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 DUSP8Q13202 625 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 APOFQ13790 326 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 WDSUB1Q8N9V3 476 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 CCL4L1Q8NHW4 92 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 FCRL1Q96LA6 429 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OR2A14Q96R47 310 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 OR52D1Q9H346 318 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 CENPMQ9NSP4 180 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 NSG1A0A0A6YYJ2 146 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 A0A1B0GVI7 797 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ELAVL4P26378 380 aaKnown RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 BMXP51813 675 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ADARB1P78563 741 aaKnown RBP11.3□□□□□ -0.6
SMAD9-201ENST00000350148 SLC3A1Q07837 685 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 LTB4RQ15722 352 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 RAB12Q6IQ22 244 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ANKRD53Q8N9V6 530 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 LILRB4Q8NHJ6 448 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 TMED9Q9BVK6 235 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 IL7P13232 177 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 NXPH1P58417 271 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ZIC1Q15915 447 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 UBE2UQ5VVX9 321 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 SLC18B1Q6NT16 456 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 UEVLDQ8IX04 471 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 FBXL6Q8N531 539 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 MRI1Q9BV20 369 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 LRRN3Q9H3W5 708 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms