RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GSK3BP49841 420 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 MAP2K6P52564 334 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 GFRA1P56159 465 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 RPS3AP61247 264 aaKnown RBP10.71□□□□□ -0.69
SNCA-202ENST00000345009 NCALDP61601 193 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 RAC1P63000 192 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 SLC25A3Q00325 362 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 CRYZQ08257 329 aaKnown RBP10.71□□□□□ -0.69
SNCA-202ENST00000345009 FLNCQ14315 2725 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 NDUFAF6Q330K2 333 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 PDSS1Q5T2R2 415 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 TMEM211Q6ICI0 200 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 ZNF585AQ6P3V2 769 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 MYO7BQ6PIF6 2116 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 CLIP4Q8N3C7 705 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 DIDO1Q9BTC0 2240 aaKnown RBP10.71□□□□□ -0.69
SNCA-202ENST00000345009 UGT2B28Q9BY64 529 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 C1orf21Q9H246 121 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 ACER3Q9NUN7 267 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 ADPRHL2Q9NX46 363 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 PAQR5Q9NXK6 330 aaPredicted RBP10.71□□□□□ -0.69
SNCA-202ENST00000345009 SELENONQ9NZV5 590 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 RPS6KB2Q9UBS0 482 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 CAMK2AQ9UQM7 478 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 SLC9A8Q9Y2E8 581 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 LIPGQ9Y5X9 500 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 HIVEP3Q5T1R4 2406 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 C17orf51A8MQB3 221 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 H0Y3Z8 333 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 SYT5O00445 386 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 CXCR6O00574 342 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 OIP5O43482 229 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 WISP2O76076 250 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 HSD17B1P14061 328 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 PRKCAP17252 672 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 ACVR2AP27037 513 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 HTR1EP28566 365 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 KDELR2P33947 212 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 CA7P43166 264 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 SESN3P58005 492 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 RELBQ01201 579 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 MERTKQ12866 999 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 EPS8Q12929 822 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 DNAL1Q4LDG9 190 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 C4orf17Q53FE4 359 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 SLC25A53Q5H9E4 307 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 WBP2NLQ6ICG8 309 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 GRINAQ7Z429 371 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 CD163Q86VB7 1156 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 RANBP3LQ86VV4 465 aaPredicted RBP10.7□□□□□ -0.7
SNCA-202ENST00000345009 DOLPP1Q86YN1 238 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 SMYD1Q8NB12 490 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 RBM15BQ8NDT2 890 aaKnown RBP10.7□□□□□ -0.7
SNCA-202ENST00000345009 OR5M9Q8NGP3 310 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 FBXO27Q8NI29 283 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 SLC25A43Q8WUT9 341 aaPredicted RBP10.7□□□□□ -0.7
SNCA-202ENST00000345009 FIG4Q92562 907 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 RELTQ969Z4 430 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 RNF145Q96MT1 663 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 TRIM2Q9C040 744 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 TMEM27Q9HBJ8 222 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 TIGARQ9NQ88 270 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 SPRR3Q9UBC9 169 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 PRPF19Q9UMS4 504 aaKnown RBP10.7□□□□□ -0.7
SNCA-202ENST00000345009 SLC5A6Q9Y289 635 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 ZNF337Q9Y3M9 751 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 MED12Q93074 2177 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 HEATR5AQ86XA9 2040 aa10.7□□□□□ -0.7
SNCA-202ENST00000345009 PCNX3Q9H6A9 2034 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 B4DXG7 233 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 E9PLN8 166 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 H3BML4 177 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 ETV2O00321 342 aaPredicted RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 CCL21O00585 134 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 GYG2O15488 501 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 UBOX5O94941 541 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 STAMBPO95630 424 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 GKN3PP0CG01 181 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 T-ENOLP0DO92 83 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 CXCR1P25024 350 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 SLC7A1P30825 629 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 IFNA8P32881 189 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 UQCRFS1P47985 274 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 KCNJ5P48544 419 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 RGS8P57771 180 aaPredicted RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 B3GALT5-AS1P59052 145 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 CBX1P83916 185 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 SRYQ05066 204 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 DMTNQ08495 405 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 FOXF1Q12946 379 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 SELENBP1Q13228 472 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 C3AR1Q16581 482 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 TMEM44Q2T9K0 475 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 LRRC23Q53EV4 343 aaPredicted RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 FGD2Q7Z6J4 655 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 CHERPQ8IWX8 916 aaKnown RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 LILRA2Q8N149 483 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 CADM2Q8N3J6 435 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 OR52E4Q8NGH9 312 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms