RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 RNF32Q9H0A6 362 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 MTRF1O75570 445 aaKnown RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 TPBGQ13641 420 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 PXT1Q8NFP0 134 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CDS1Q92903 461 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 FOXN4Q96NZ1 517 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ZNF559Q9BR84 538 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 TAS2R8Q9NYW2 309 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CLEC4EQ9ULY5 219 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 HEPACAM2A8MVW5 462 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 STK25O00506 426 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ZNF254O75437 659 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 C1orf105O95561 183 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 C1SP09871 688 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 HCCSP53701 268 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 AMZ1Q400G9 498 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ZNF585AQ6P3V2 769 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 BHLHA9Q7RTU4 235 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SLC51BQ86UW2 128 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 OR5AK2Q8NH90 309 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SETD7Q8WTS6 366 aaKnown RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 MTHFD2LQ9H903 347 aaPredicted RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ISG20L2Q9H9L3 353 aaKnown RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CXCL3P19876 107 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CR2P20023 1033 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CDONQ4KMG0 1287 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 GLT8D1Q68CQ7 371 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SLC35F2Q8IXU6 374 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 METTL21AQ8WXB1 218 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 UBQLN3Q9H347 655 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 NOX4Q9NPH5 578 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 MEMO1Q9Y316 297 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SNAPC5O75971 98 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SNRNP70P08621 437 aaKnown RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 PTHLHP12272 177 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CXADRP78310 365 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 IRF3Q14653 427 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ARHGAP40Q5TG30 622 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 TMUB2Q71RG4 321 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ATF6BQ99941 703 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 PELOQ9BRX2 385 aaKnown RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CRB3Q9BUF7 120 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 TRAF4Q9BUZ4 470 aaPredicted RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SEMA4CQ9C0C4 833 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ASB6Q9NWX5 421 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SLC6A5Q9Y345 797 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CACNA1IQ9P0X4 2223 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 TRIM64A6NGJ6 449 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 CSTAP01040 98 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 UBBP0CG47 229 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 UBCP0CG48 685 aaKnown RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 LRRC25Q8N386 305 aaPredicted RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 CHST8Q9H2A9 424 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 MIXL1Q9H2W2 232 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 CASC3O15234 703 aaKnown RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 OR8G3PP0DMU2 310 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 CHAF1BQ13112 559 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 FAM83HQ6ZRV2 1179 aaPredicted RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 SCARB1Q8WTV0 552 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 ZFPM2Q8WW38 1151 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 IRF7Q92985 503 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 OR7D2Q96RA2 312 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 PFDN5Q99471 154 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 ATP1B1P05026 303 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 CXCR1P25024 350 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 TEAD1P28347 426 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 CCR9P51686 369 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 LCN10Q6JVE6 187 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 NEURL3Q96EH8 262 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 PDXPQ96GD0 296 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 ACTRT3Q9BYD9 372 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 PLA2G12AQ9BZM1 189 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 PDFQ9HBH1 243 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 ZNFX1Q9P2E3 1918 aaKnown RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 FBXO24O75426 580 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 TPPPO94811 219 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 ADRB3P13945 408 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 WNT3P56703 355 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 SEC61A1P61619 476 aaKnown RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 SLC25A35Q3KQZ1 300 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 ACOT4Q8N9L9 421 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 STEAP2Q8NFT2 490 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 OR10R2Q8NGX6 335 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 HCAR2Q8TDS4 363 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 NEK7Q8TDX7 302 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 WBP2Q969T9 261 aa11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 PLEKHB1Q9UF11 243 aaPredicted RBP11.69□□□□□ -0.54
SSX2IP-201ENST00000342203 PLGP00747 810 aaPredicted RBP11.68□□□□□ -0.54
SSX2IP-201ENST00000342203 SOX9P48436 509 aa11.68□□□□□ -0.54
SSX2IP-201ENST00000342203 FAM71E1Q6IPT2 247 aa11.68□□□□□ -0.54
SSX2IP-201ENST00000342203 OR8D4Q8NGM9 314 aa11.68□□□□□ -0.54
SSX2IP-201ENST00000342203 SLC6A20Q9NP91 592 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms