RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 GAS6Q14393 721 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 UTS2BQ765I0 119 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 RFT1Q96AA3 541 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 ANKRD9Q96BM1 317 aaPredicted RBP12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 LMF2Q9BU23 707 aaKnown RBP12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 TMEM168Q9H0V1 697 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 TMEM27Q9HBJ8 222 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 MCCC2Q9HCC0 563 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 ICAM5Q9UMF0 924 aa12.42□□□□□ -0.42
SECISBP2-201ENST00000339901 LRRC72A6NJI9 287 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 OGG1O15527 345 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 LANCL1O43813 399 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 GALR3O60755 368 aaPredicted RBP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ZNF3P17036 446 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 NOS3P29474 1203 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ACTR1BP42025 376 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ACAA2P42765 397 aaKnown RBP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ACTR1AP61163 376 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 GPR18Q14330 331 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 BICRALQ6AI39 1079 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 THOC7Q6I9Y2 204 aaKnown RBP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 RTL4Q6ZR62 310 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 PRSS41Q7RTY9 318 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 MS4A15Q8N5U1 240 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 C17orf47Q8NEP4 570 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 OR4C6Q8NH72 309 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 FAM3CQ92520 227 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 NACC2Q96BF6 587 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 C4orf36Q96KX1 117 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 TBX5Q99593 518 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 WACQ9BTA9 647 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 SLC28A3Q9HAS3 691 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 EVA1BQ9NVM1 165 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 RASD1Q9Y272 281 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 GXYLT2A0PJZ3 443 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 INMT-MINDY4F8WBC2 141 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 CBX7O95931 251 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 NT5EP21589 574 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 TALDO1P37837 337 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 INPP1P49441 399 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ID2Q02363 134 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 KLHL12Q53G59 568 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 FAAH2Q6GMR7 532 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 PYHIN1Q6K0P9 492 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ARHGAP11AQ6P4F7 1023 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 ARL9Q6T311 187 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 CEACAM19Q7Z692 300 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 SLC44A3Q8N4M1 653 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 HAVCR2Q8TDQ0 301 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 TSACCQ96A04 125 aaPredicted RBP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 RERGQ96A58 199 aaPredicted RBP12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 LMAN2LQ9H0V9 348 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 CDH23Q9H251 3354 aa12.41□□□□□ -0.42
SECISBP2-201ENST00000339901 OR6C74A6NCV1 312 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 C10orf142B7Z368 130 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 POLR2CP19387 275 aaPredicted RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 GABRA3P34903 492 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 LSSP48449 732 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 CRMP1Q14194 572 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SYCE2Q6PIF2 218 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ARHGEF39Q8N4T4 335 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ZNF655Q8N720 491 aaPredicted RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ART5Q96L15 291 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 DNAJB12Q9NXW2 375 aaKnown RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 TRAV27A0A087WT01 109 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 GRXCR1A8MXD5 290 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 H0Y8X5 98 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ZNF780AO75290 641 aaPredicted RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 NGFRP08138 427 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 S1PR1P21453 382 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 GALK2Q01415 458 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 EXOSC7Q15024 291 aaKnown RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ZSWIM7Q19AV6 140 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ZNF57Q68EA5 555 aaPredicted RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 FIGNL1Q6PIW4 674 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 ZAR1Q86SH2 424 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SHISA5Q8N114 240 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SYS1Q8N2H4 156 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 CHRNA9Q9UGM1 479 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 A0A1B0GWA3 101 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 C7orf66A4D0T2 115 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 PAHP00439 452 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SLC35E2P0CK97 266 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SAGP10523 405 aaPredicted RBP12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SLC6A6P31641 620 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 OR10A3P58181 314 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 OR12D2P58182 307 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 MAB21L1Q13394 359 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SLC36A2Q495M3 483 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 FAM27D1Q5T7N8 215 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 SAMD12Q8N8I0 201 aa12.4□□□□□ -0.42
SECISBP2-201ENST00000339901 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms