RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TFPIP10646 304 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 ABCE1P61221 599 aaKnown RBP17.27■□□□□ 0.35
ITGA4-202ENST00000339307 RASGEF1BQ0VAM2 473 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 MERTKQ12866 999 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 TAB1Q15750 504 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 ATAD3BQ5T9A4 648 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 C3orf33Q6P1S2 294 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.27■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF563Q8TA94 476 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 HSD17B8Q92506 261 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 ZIM3Q96PE6 472 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 NMUR2Q9GZQ4 415 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 LAT2Q9GZY6 243 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 GP6Q9HCN6 339 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 RNF115Q9Y4L5 304 aa17.27■□□□□ 0.35
ITGA4-202ENST00000339307 RAI1Q7Z5J4 1906 aaPredicted RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 RNASET2O00584 256 aaKnown RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 SERPINE1P05121 402 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 OR12D1P0DN82 309 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 PGCP20142 388 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 RYKP34925 604 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 ETV4P43268 484 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 SESN3P58005 492 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 RPS4XP62701 263 aaKnown RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 PPP2R2BQ00005 443 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 ITGADQ13349 1161 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 CASP8Q14790 479 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 ARHGAP11BQ3KRB8 267 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 TNFAIP8L2Q6P589 184 aaPredicted RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 EIF3MQ7L2H7 374 aaKnown RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 BHLHA15Q7RTS1 189 aaPredicted RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF100Q8IYN0 542 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 VPS37AQ8NEZ2 397 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 TMEM234Q8WY98 164 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 RAB8BQ92930 207 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 GTPBP3Q969Y2 492 aaKnown RBP17.26■□□□□ 0.35
ITGA4-202ENST00000339307 DNAJA3Q96EY1 480 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 TMEM204Q9BSN7 226 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 PRSS50Q9UI38 385 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 KCNE5Q9UJ90 142 aa17.26■□□□□ 0.35
ITGA4-202ENST00000339307 CENPVL1A0A0U1RR11 272 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 UGT2B17O75795 530 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 LYZL6O75951 148 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 H6PDO95479 791 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 NID1P14543 1247 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 CHI3L1P36222 383 aaPredicted RBP17.25■□□□□ 0.35
ITGA4-202ENST00000339307 C21orf58P58505 322 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 SKP2Q13309 424 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 P2RY6Q15077 328 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF141Q15928 474 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 SLC25A53Q5H9E4 307 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 CEP85LQ5SZL2 805 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 ANXA8L1Q5VT79 327 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 HDXQ7Z353 690 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 HMGN2P46Q86SG4 172 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 FBXW5Q969U6 566 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF300Q96RE9 604 aaPredicted RBP17.25■□□□□ 0.35
ITGA4-202ENST00000339307 PSD2Q9BQI7 771 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 VIPAS39Q9H9C1 493 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 ASIC5Q9NY37 505 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 RAP2CQ9Y3L5 183 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 WDR45Q9Y484 360 aa17.25■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF814B7Z6K7 855 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 SULT2B1O00204 365 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 AGR2O95994 175 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 UQCRC2P22695 453 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 SLC1A6P48664 564 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 DIO1P49895 249 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 RPL14P50914 215 aaKnown RBP17.24■□□□□ 0.35
ITGA4-202ENST00000339307 HPCAP84074 193 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 SMU1Q2TAY7 513 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 GPAT3Q53EU6 434 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 NCMAPQ5T1S8 102 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 ATG4DQ86TL0 474 aaPredicted RBP17.24■□□□□ 0.35
ITGA4-202ENST00000339307 UBE2J2Q8N2K1 259 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 ST8SIA1Q92185 356 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 NEUROG1Q92886 237 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 TRMT61AQ96FX7 289 aaKnown RBP17.24■□□□□ 0.35
ITGA4-202ENST00000339307 PAIP2Q9BPZ3 127 aaKnown RBP17.24■□□□□ 0.35
ITGA4-202ENST00000339307 POTEKPQ9BYX7 375 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 NUF2Q9BZD4 464 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 BCO1Q9HAY6 547 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 KCNK9Q9NPC2 374 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 ROS1P08922 2347 aa17.24■□□□□ 0.35
ITGA4-202ENST00000339307 PRSS51A0A1B0GVH4 220 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 SMAD9O15198 467 aaKnown RBP17.23■□□□□ 0.35
ITGA4-202ENST00000339307 CYTIPO60759 359 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 FESP07332 822 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 CCNA2P20248 432 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 OR3A2P47893 321 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 NME5P56597 212 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 CSNK2A1P68400 391 aaPredicted RBP17.23■□□□□ 0.35
ITGA4-202ENST00000339307 FAPQ12884 760 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 Q6ZT83 130 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 OR8J2Q8NGG1 315 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 MUCL1Q96DR8 90 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF350Q9GZX5 532 aa17.23■□□□□ 0.35
ITGA4-202ENST00000339307 ZNF701Q9NV72 531 aaPredicted RBP17.23■□□□□ 0.35
ITGA4-202ENST00000339307 A0A1W2PP18 115 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 BIRC5O15392 142 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms