RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 HMGN1P05114 100 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 SAGP10523 405 aaPredicted RBP10.21□□□□□ -0.78
LRP1-202ENST00000338962 BMP7P18075 431 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 CSF2RBP32927 897 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 GRK5P34947 590 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 UGT2B10P36537 528 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 CCL7P80098 99 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 RSPO4Q2I0M5 234 aaPredicted RBP10.21□□□□□ -0.78
LRP1-202ENST00000338962 D2HGDHQ8N465 521 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 NANOGP1Q8N7R0 232 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 ZNF615Q8N8J6 731 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 OR1L3Q8NH93 324 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 BPIFA2Q96DR5 249 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 ARSGQ96EG1 525 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 SAMD8Q96LT4 415 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 DPYSL5Q9BPU6 564 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 TRIM2Q9C040 744 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 SLIRPQ9GZT3 109 aaKnown RBP10.21□□□□□ -0.78
LRP1-202ENST00000338962 OR52D1Q9H346 318 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 HHATLQ9HCP6 504 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 LANCL2Q9NS86 450 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 C20orf141Q9NUB4 165 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 ZNF223Q9UK11 482 aaPredicted RBP10.21□□□□□ -0.78
LRP1-202ENST00000338962 LSM2Q9Y333 95 aaKnown RBP10.21□□□□□ -0.78
LRP1-202ENST00000338962 MMACHCQ9Y4U1 282 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 SEC16AO15027 2179 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 A0A1B0GWA3 101 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 RFPL3O75679 317 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 LYPD3O95274 346 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 SOX3P41225 446 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 ATP12AP54707 1039 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 CDH11P55287 796 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 PRKCDQ05655 676 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 DSG2Q14126 1118 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 FGFBP1Q14512 234 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 OXA1LQ15070 435 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 ZNF141Q15928 474 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 ALG10BQ5I7T1 473 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 C3orf38Q5JPI3 329 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 RPL13AP3Q6NVV1 102 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 ZNF550Q7Z398 422 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 AMER2Q8N7J2 671 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 BCORP1Q8N888 145 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 OR7G1Q8NGA0 311 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 BRIX1Q8TDN6 353 aaKnown RBP10.2□□□□□ -0.78
LRP1-202ENST00000338962 CLIP3Q96DZ5 547 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 HS6ST2Q96MM7 605 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 OPALINQ96PE5 141 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 CENPOQ9BU64 300 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 TAPBPLQ9BX59 468 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 UBQLN3Q9H347 655 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 ATP13A2Q9NQ11 1180 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 PNO1Q9NRX1 252 aaKnown RBP10.2□□□□□ -0.78
LRP1-202ENST00000338962 SEMA5BQ9P283 1151 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 CORINQ9Y5Q5 1042 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 CLCA3PQ9Y6N3 262 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 PMF1-BGLAPU3KQ54 211 aa10.2□□□□□ -0.78
LRP1-202ENST00000338962 NPIPB9F8W1W9 429 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 POLR1CO15160 346 aaPredicted RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 APOL3O95236 402 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 GSTT2P0CG29 244 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 GSTT2BP0CG30 244 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 FOLR1P15328 257 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 MAKP20794 623 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 TMED10P49755 219 aaKnown RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 RPS3AP61247 264 aaKnown RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.19□□□□□ -0.78
LRP1-202ENST00000338962 SSX1Q16384 188 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 SOWAHCQ53LP3 525 aaPredicted RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 PRAMEF17Q5VTA0 474 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 TMEM71Q6P5X7 295 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 C19orf48Q6RUI8 117 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 QSOX2Q6ZRP7 698 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 TMPRSS11FQ6ZWK6 438 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 PRSS42Q7Z5A4 293 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 ATCAYQ86WG3 371 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 KMT5CQ86Y97 462 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 CMIPQ8IY22 773 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 LSMEM1Q8N8F7 131 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 OR9Q1Q8NGQ5 310 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 MCFD2Q8NI22 146 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 SENP5Q96HI0 755 aaPredicted RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 SLC41A2Q96JW4 573 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 NEURL2Q9BR09 285 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 AKIP1Q9NQ31 210 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 FBXO8Q9NRD0 319 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 ENAMQ9NRM1 1142 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 MRPS18AQ9NVS2 196 aaKnown RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 FLRT3Q9NZU0 649 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 SERTAD3Q9UJW9 196 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 PCDHGA3Q9Y5H0 932 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 DMXL1Q9Y485 3027 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 CFAP54Q96N23 3096 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 SYNDIG1LA6NDD5 238 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 HYAL3O43820 417 aaPredicted RBP10.19□□□□□ -0.78
LRP1-202ENST00000338962 ADAM11O75078 769 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 RCBTB2O95199 551 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 CSTAP01040 98 aa10.19□□□□□ -0.78
LRP1-202ENST00000338962 HBQ1P09105 142 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms