RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 P3H2Q8IVL5 708 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RNF113BQ8IZP6 322 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 HS6ST2Q96MM7 605 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 HPF1Q9NWY4 346 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GMPPBQ9Y5P6 360 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MED13Q9UHV7 2174 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 EIF4E1BA6NMX2 242 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 B4DXG7 233 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SOX14O95416 240 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IGFBP1P08833 259 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SDHBP21912 280 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ITGA3P26006 1051 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 POU1F1P28069 291 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GSSP48637 474 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CRISP1P54107 249 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ESRRGP62508 458 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 COX10Q12887 443 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TSPAN31Q12999 210 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RAPSNQ13702 412 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 KEAP1Q14145 624 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MEP1AQ16819 746 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PRAMEF20Q5VT98 475 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 JMJD6Q6NYC1 403 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TTC33Q6PID6 262 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CD300LDQ6UXZ3 194 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 DND1Q8IYX4 353 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 C8orf59Q8N0T1 100 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GPR119Q8TDV5 335 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GATA6Q92908 595 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 NXPE2Q96DL1 559 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FER1L6-AS2Q96M78 137 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ZNF426Q9BUY5 554 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 C20orf141Q9NUB4 165 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MED11Q9P086 117 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PPP4R1LQ9P1A2 415 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ENOPH1Q9UHY7 261 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 NDRG4Q9ULP0 352 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MED31Q9Y3C7 131 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 WIF1Q9Y5W5 379 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MPDZO75970 2070 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 A0A087WUJ7 227 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 E9PQ18 207 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 NKX2-8O15522 239 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CDC40O60508 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TP53P04637 393 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IFI30P13284 250 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SPINK2P20155 84 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GSTM3P21266 225 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CHMP24386 653 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RBM34P42696 430 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SLC1A3P43003 542 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CHN2P52757 468 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PRKCDQ05655 676 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 AIMP2Q13155 320 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ZNF691Q5VV52 312 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ATG4DQ86TL0 474 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CLEC1AQ8NC01 280 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 HRASLS5Q96KN8 279 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 DSN1Q9H410 356 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CXorf56Q9H5V9 222 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MEPEQ9NQ76 525 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SDHAF3Q9NRP4 125 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ANKRD10Q9NXR5 420 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 HRH3Q9Y5N1 445 aa13.44□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CPAMD8Q8IZJ3 1885 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ELOA3DA6NLF2 546 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 H3BN98 237 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CCL3P10147 92 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PRKAR1AP10644 381 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MAKP20794 623 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TACR3P29371 465 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MYBPC1Q00872 1141 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PTGES3Q15185 160 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 QPRTQ15274 297 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 INPP5JQ15735 1006 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TBC1D25Q3MII6 688 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ELOA3BQ3SY89 546 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMEM236Q5W0B7 351 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 THAP5Q7Z6K1 395 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 BEST3Q8N1M1 668 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ELOA3Q8NG57 546 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PAQR8Q8TEZ7 354 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PITX2Q99697 317 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 DPH1Q9BZG8 443 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 LHPPQ9H008 270 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ADAM19Q9H013 955 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 STMN3Q9NZ72 180 aa13.43□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ANKUB1A6NFN9 424 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CDC42EP2O14613 210 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 KLF4O43474 513 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 LYNP07948 512 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PNMTP11086 282 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GP1BBP13224 206 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 WT1P19544 449 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FPR3P25089 353 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CLN3Q13286 438 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IL18R1Q13478 541 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SLC22A10Q63ZE4 541 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms