RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ICKQ9UPZ9 632 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 A0A0G2JPF8 293 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 PRAMEF27A3QJZ7 478 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 CPED1A4D0V7 1026 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 HNRNPCL3B7ZW38 293 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 RCBTB2O95199 551 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 CELA2BP08218 269 aaPredicted RBP7.65□□□□□ -1.18
HPS4-201ENST00000336873 HNRNPCL4P0DMR1 293 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 C5AR1P21730 350 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 UBE2MP61081 183 aaKnown RBP7.65□□□□□ -1.18
HPS4-201ENST00000336873 BTG2P78543 158 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 E2F1Q01094 437 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 IRF3Q14653 427 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 KANSL1Q7Z3B3 1105 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 RFT1Q96AA3 541 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 JSRP1Q96MG2 331 aaPredicted RBP7.65□□□□□ -1.18
HPS4-201ENST00000336873 DGAT2Q96PD7 388 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 HHIPQ96QV1 700 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 OR14A2Q96R54 314 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 HCAR1Q9BXC0 346 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 GABARAPL3Q9BY60 117 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 SEMA4CQ9C0C4 833 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 MTHFD2LQ9H903 347 aaPredicted RBP7.65□□□□□ -1.18
HPS4-201ENST00000336873 SLC6A20Q9NP91 592 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 FBXL21Q9UKT6 434 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 MRPS33Q9Y291 106 aaKnown RBP7.65□□□□□ -1.18
HPS4-201ENST00000336873 KLK4Q9Y5K2 254 aa7.65□□□□□ -1.18
HPS4-201ENST00000336873 ZNF670-ZNF695F2Z2N8 137 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 MAN2B1O00754 1011 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 IMPA2O14732 288 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 UCHL1P09936 223 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 THEGLP0DJG4 465 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 HSD17B2P37059 387 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 GNG2P59768 71 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 FGL2Q14314 439 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 PGGHGQ32M88 737 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 FAM209AQ5JX71 171 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 SLX4IPQ5VYV7 408 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 SAXO2Q658L1 398 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 LEG1Q6P5S2 330 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 LRFN4Q6PJG9 635 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 GPR135Q8IZ08 494 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 NATD1Q8N6N6 113 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 NANOGP1Q8N7R0 232 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 DEDD2Q8WXF8 326 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 RASD2Q96D21 266 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 ZFYVE21Q9BQ24 234 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 ORAI3Q9BRQ5 295 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 THAP7Q9BT49 309 aaPredicted RBP7.65□□□□□ -1.19
HPS4-201ENST00000336873 PDCD10Q9BUL8 212 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 SEC61A2Q9H9S3 476 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 FBXO8Q9NRD0 319 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 SIRT3Q9NTG7 399 aaPredicted RBP7.65□□□□□ -1.19
HPS4-201ENST00000336873 OR6C2Q9NZP2 312 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 ALG5Q9Y673 324 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 PTPRDP23468 1912 aa7.65□□□□□ -1.19
HPS4-201ENST00000336873 FXYD6-FXYD2A0A087WZ82 144 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 C17orf113A0A1B0GUU1 675 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 E9PI62 339 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SOX1O00570 391 aaPredicted RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 XKRYO14609 159 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CTSVO60911 334 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 LGI1O95970 557 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 HRGP04196 525 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CEACAM5P06731 702 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 HNRNPA1P09651 372 aaKnown RBP eCLIP7.64□□□□□ -1.19
HPS4-201ENST00000336873 CSF3P09919 207 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 OR8G3PP0DMU2 310 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 ACP2P11117 423 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 IGFALSP35858 605 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 GBX2P52951 348 aaPredicted RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 MLLT11Q13015 90 aaPredicted RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 YOD1Q5VVQ6 348 aaPredicted RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 SLC48A1Q6P1K1 146 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 FOXRED2Q8IWF2 684 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CCDC28AQ8IWP9 274 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 VWA5B2Q8N398 1253 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 JAGN1Q8N5M9 183 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SIRT6Q8N6T7 355 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 TMIEQ8NEW7 156 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SLC22A18Q96BI1 424 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 HS6ST2Q96MM7 605 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 MYADMQ96S97 322 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SPATA9Q9BWV2 254 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 FXYD6Q9H0Q3 95 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SLITRK2Q9H156 845 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SLC38A1Q9H2H9 487 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 MAFFQ9ULX9 164 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 ZNF443Q9Y2A4 671 aaPredicted RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 SCN8AQ9UQD0 1980 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 A0A1B0GTH9 108 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 TRAPPC13A5PLN9 417 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 FLRT2O43155 660 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 GPANK1O95872 356 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 EGFP01133 1207 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 PROS1P07225 676 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 AKT2P31751 481 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 MNDAP41218 407 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 HNRNPFP52597 415 aaKnown RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 RUNX2Q13950 521 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms