RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 RBM34P42696 430 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TUBA1BP68363 451 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TSPAN31Q12999 210 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 GAB4Q2WGN9 574 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF528Q3MIS6 628 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 PGM2L1Q6PCE3 622 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 DHRS4L2Q6PKH6 230 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TUBA1AQ71U36 451 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 BCORP1Q8N888 145 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 UCN3Q969E3 161 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TRAV36DV7A0A075B6V5 113 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF208O43345 1280 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 MT-ATP6P00846 226 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 MRPL3P09001 348 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TACR3P29371 465 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 DCTN2Q13561 401 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 IL18Q14116 193 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 PLBD1Q6P4A8 553 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 SLC23A3Q6PIS1 610 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 FAM180AQ6UWF9 173 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 OR1N1Q8NGS0 311 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 KCNE4Q8WWG9 221 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TSLPQ969D9 159 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TMED9Q9BVK6 235 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TNFRSF12AQ9NP84 129 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 RBM7Q9Y580 266 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 SORBS2O94875 1100 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 RPS5P46782 204 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TIAL1Q01085 375 aaKnown RBP eCLIP8.62□□□□□ -1.033e-7■■■■□ 21.5
FNDC3B-201ENST00000336824 FCRL6Q6DN72 434 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF227Q86WZ6 799 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TTC9Q92623 222 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 WWTR1Q9GZV5 400 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 QRSL1Q9H0R6 528 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ANKRA2Q9H9E1 313 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 SEMA4GQ9NTN9 838 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ARGFXA6NJG6 315 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TMEM53Q6P2H8 277 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 OR2I1PQ8NGU4 316 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 RBM24Q9BX46 236 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 IGHV3-20A0A0C4DH32 117 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 PLOD2O00469 737 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 LILRB5O75023 590 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 LGI1O95970 557 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ERCC1P07992 297 aaPredicted RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 PCBD1P61457 104 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 AIMP2Q13155 320 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 SF3A2Q15428 464 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 C2orf16Q68DN1 1984 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF836Q6ZNA1 936 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 SIRT6Q8N6T7 355 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 KLHL15Q96M94 604 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 TUBA1CQ9BQE3 449 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 ABCG2Q9UNQ0 655 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 PCDHGB6Q9Y5F9 930 aa8.62□□□□□ -1.03
FNDC3B-201ENST00000336824 EME2A4GXA9 379 aaPredicted RBP8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CCRL2O00421 344 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 P2RX6O15547 441 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 GALR2O43603 387 aaPredicted RBP8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF12P17014 697 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 TSTQ16762 297 aaKnown RBP8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 TAMM41Q96BW9 452 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DSN1Q9H410 356 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DIABLOQ9NR28 239 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 SIRT5Q9NXA8 310 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 TMEM9Q9P0T7 183 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CSTBP04080 98 aaKnown RBP8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 IFNA6P05013 189 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CYC1P08574 325 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 GGT2P36268 569 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 HNRNPFP52597 415 aaKnown RBP8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 ADAM8P78325 824 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 TMEM176BQ3YBM2 270 aaPredicted RBP8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 RAB33BQ9H082 229 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 FSCN3Q9NQT6 498 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CD300AQ9UGN4 299 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 IER3IP1Q9Y5U9 82 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 A0A1B0GW55 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 A0A1W2PQ72 361 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 A8MVM7 634 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 PTHP01270 115 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 HCKP08631 526 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4L2P0CJ85 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4L3P0CJ86 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4L4P0CJ87 422 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4L5P0CJ88 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4L6P0CJ89 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4L7P0CJ90 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 MAPK11Q15759 364 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CHST4Q8NCG5 386 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CNIH3Q8TBE1 160 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 CSF3RQ99062 836 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 BCL2L10Q9HD36 194 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 MED17Q9NVC6 651 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 DUX4Q9UBX2 424 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 SLC7A11Q9UPY5 501 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 A0A087WZY1 265 aa8.61□□□□□ -1.03
FNDC3B-201ENST00000336824 IGHV5-10-1A0A0J9YXX1 117 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms