RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SYT5O00445 386 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 RNF13O43567 381 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 RGS9O75916 674 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 DHFRP00374 187 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 F8A1P23610 371 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 SRP9P49458 86 aaKnown RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ATP12AP54707 1039 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 GAS1P54826 345 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 DEFA5Q01523 94 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 BICRALQ6AI39 1079 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 MBOAT2Q6ZWT7 520 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 GPAT4Q86UL3 456 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ETFBKMTQ8IXQ9 262 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 PM20D2Q8IYS1 436 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 PFN4Q8NHR9 129 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 SFXN5Q8TD22 340 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 MTHFD2LQ9H903 347 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 IL20Q9NYY1 176 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 USP36Q9P275 1121 aaKnown RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ELF5Q9UKW6 265 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ZNF443Q9Y2A4 671 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 NCKAP1Q9Y2A7 1128 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 OBSL1O75147 1896 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ALPK2Q86TB3 2170 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 UNC119BA6NIH7 251 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 TEAD1P28347 426 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 TLX1P31314 330 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ACSL1P33121 698 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 RRAS2P62070 204 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ZNF155Q12901 538 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 LRRC25Q8N386 305 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 COX18Q8N8Q8 333 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 OR5W2Q8NH69 310 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 PITHD1Q9GZP4 211 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 RNF32Q9H0A6 362 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 NUDT15Q9NV35 164 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 EMC3Q9P0I2 261 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 MLXQ9UH92 298 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 NOSIPQ9Y314 301 aaKnown RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 KAT7O95251 611 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 SLC35G6P0C7Q6 338 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 CRYZQ08257 329 aaKnown RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ZC3H14Q6PJT7 736 aaKnown RBP15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 SYT9Q86SS6 491 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 POGLUT1Q8NBL1 392 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 OR4K14Q8NGD5 310 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 OR4C6Q8NH72 309 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ZNF671Q8TAW3 534 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 NDC1Q9BTX1 674 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 MENTQ9BUN1 341 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 ACTR6Q9GZN1 396 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 UBQLN2Q9UHD9 624 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 PRELID3BQ9Y3B1 194 aa15.34■□□□□ 0.05
CDC42EP4-201ENST00000335793 SPTBP11277 2137 aa15.33■□□□□ 0.05
CDC42EP4-201ENST00000335793 TRAV27A0A087WT01 109 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 TTLL8A6PVC2 850 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 PROM1O43490 865 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC19A2O60779 497 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 LDB3O75112 727 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 RGS11O94810 467 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 RAF1P04049 648 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 ERGP11308 486 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 AK4P27144 223 aaPredicted RBP15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 HLA-DMAP28067 261 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 DECR1Q16698 335 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 C2orf27AQ580R0 203 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 CCDC36Q8IYA8 594 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF578Q96N58 590 aaPredicted RBP15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 NPAS1Q99742 590 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC28A3Q9HAS3 691 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 PLCL2Q9UPR0 1127 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 PLXNA2O75051 1894 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 DNAH14Q0VDD8 3507 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 A0A1W2PPL8 197 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 A0A1W2PQU0 124 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 TO15178 435 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 MAGEB4O15481 346 aaPredicted RBP15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 HNRNPA1P09651 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 CD3GP09693 182 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF806P0C7X5 589 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 NTRK2Q16620 822 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 DUSP5Q16690 384 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 TRMT12Q53H54 448 aaKnown RBP15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR2L8Q8NGY9 312 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 RAB11FIP5Q9BXF6 653 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 ENKD1Q9H0I2 346 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 ISYNA1Q9NPH2 558 aa15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 SIDT1Q9NXL6 827 aaKnown RBP15.33■□□□□ 0.04
CDC42EP4-201ENST00000335793 SZT2Q5T011 3432 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 LOC105369274A0A096LPK9 316 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 CENPVL1A0A0U1RR11 272 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ATG12O94817 140 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 CLUP10909 449 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 DRD3P35462 400 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 VSX2P58304 361 aaPredicted RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 EFNB1P98172 346 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 GPR176Q14439 515 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 TMEM91Q6ZNR0 172 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR4N4Q8N0Y3 316 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 C2CD4CQ8TF44 421 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms