RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 NRGNQ92686 78 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 RSPO3Q9BXY4 272 aaPredicted RBP13.35□□□□□ -0.27
KATNA1-201ENST00000335643 RLIMQ9NVW2 624 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 DNAJB12Q9NXW2 375 aaKnown RBP13.35□□□□□ -0.27
KATNA1-201ENST00000335643 SLC35A3Q9Y2D2 325 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 CREBBPQ92793 2442 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 ZNF469Q96JG9 3925 aaPredicted RBP13.35□□□□□ -0.27
KATNA1-201ENST00000335643 TRBV5-3A0A0A0MS03 114 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 CCKARP32238 428 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 CPOXP36551 454 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 CPA2P48052 419 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 ATP4BP51164 291 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
KATNA1-201ENST00000335643 SELENBP1Q13228 472 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 SQLEQ14534 574 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 RGNQ15493 299 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 ABHD3Q8WU67 409 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 OIT3Q8WWZ8 545 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 MAL2Q969L2 176 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 DNAJA3Q96EY1 480 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 TMEM19Q96HH6 336 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 PIGMQ9H3S5 423 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 IKZF5Q9H5V7 419 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 VAPAQ9P0L0 249 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 STOML1Q9UBI4 398 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 P2RX2Q9UBL9 471 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 FOXD3Q9UJU5 478 aaPredicted RBP13.34□□□□□ -0.27
KATNA1-201ENST00000335643 CHST2Q9Y4C5 530 aa13.34□□□□□ -0.27
KATNA1-201ENST00000335643 A0A096LPI6 279 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 IGHV3-15A0A0B4J1V0 119 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 A0A0G2JND7 137 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 FAM221AA4D161 298 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 CLIC1O00299 241 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 MSTNO14793 375 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 CTAG2O75638 210 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 NCF2P19878 526 aaPredicted RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 PGCP20142 388 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 ANXA11P50995 505 aaKnown RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 CARD18P57730 90 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 TXNL4AP83876 142 aaKnown RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 SORDQ00796 357 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 MRPL2Q5T653 305 aaKnown RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 ZNF836Q6ZNA1 936 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 PLEKHM3Q6ZWE6 761 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 FAM214BQ7L5A3 538 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 TMEM200AQ86VY9 491 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 ZNF610Q8N9Z0 462 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 RNF128Q8TEB7 428 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 WDR60Q8WVS4 1066 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 STON2Q8WXE9 905 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 ST8SIA1Q92185 356 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 GPATCH1Q9BRR8 931 aaKnown RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 CCDC106Q9BWC9 280 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 PRRG4Q9BZD6 226 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 MTHFD2LQ9H903 347 aaPredicted RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 EXOSC3Q9NQT5 275 aaKnown RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 CTPS2Q9NRF8 586 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 ACER3Q9NUN7 267 aa13.33□□□□□ -0.28
KATNA1-201ENST00000335643 MCTS1Q9ULC4 181 aaKnown RBP13.33□□□□□ -0.28
KATNA1-201ENST00000335643 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 SS18L1O75177 396 aaPredicted RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 FCGR2AP12318 317 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 ENPP1P22413 925 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 MERTKQ12866 999 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 LRRC46Q96FV0 321 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 GMPPAQ96IJ6 420 aaPredicted RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 PAQR5Q9NXK6 330 aaPredicted RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 SYNGR4O95473 234 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 DBIP07108 87 aaKnown RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 CD8BP10966 210 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 BMP2P12643 396 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 IL7RP16871 459 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 AGTR1P30556 359 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 MAGEA8P43361 318 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 IDH2P48735 452 aaKnown RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 CRISP3P54108 245 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 EEF1A1P68104 462 aaKnown RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 GUCY1A3Q02108 690 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 C3orf33Q6P1S2 294 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 DLEU7Q6UYE1 221 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 C22orf34Q6ZV56 151 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 RETREG3Q86VR2 466 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 CLIP4Q8N3C7 705 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 ZNF563Q8TA94 476 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 TMEM120AQ9BXJ8 343 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 LIME1Q9H400 295 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
KATNA1-201ENST00000335643 ING1Q9UK53 422 aaPredicted RBP13.32□□□□□ -0.28
KATNA1-201ENST00000335643 SPG11Q96JI7 2443 aa13.31□□□□□ -0.28
KATNA1-201ENST00000335643 CCDC168Q8NDH2 2452 aa13.31□□□□□ -0.28
KATNA1-201ENST00000335643 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
KATNA1-201ENST00000335643 A0A1W2PP18 115 aa13.31□□□□□ -0.28
KATNA1-201ENST00000335643 CDHR4A6H8M9 788 aa13.31□□□□□ -0.28
KATNA1-201ENST00000335643 A6NNC1 897 aa13.31□□□□□ -0.28
KATNA1-201ENST00000335643 SMAD9O15198 467 aaKnown RBP13.31□□□□□ -0.28
KATNA1-201ENST00000335643 PLGP00747 810 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms