RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF671Q8TAW3 534 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 SMPDL3BQ92485 455 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 GCDHQ92947 438 aaPredicted RBP21.89■■□□□ 1.09
TSKU-201ENST00000333090 ARSGQ96EG1 525 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 ADGRL4Q9HBW9 690 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 MRPS30Q9NP92 439 aaKnown RBP21.89■■□□□ 1.09
TSKU-201ENST00000333090 CMC2Q9NRP2 79 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 KCMF1Q9P0J7 381 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 FLRT2O43155 660 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 CISD3P0C7P0 127 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 ARFIP1P53367 373 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 DMKNQ6E0U4 476 aaPredicted RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 SRFBP1Q8NEF9 429 aaKnown RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 OR2L5Q8NG80 312 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 OR13C2Q8NGS9 318 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 RBPMSQ93062 196 aaKnown RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 RADILQ96JH8 1075 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 ZNF681Q96N22 645 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 C7orf50Q9BRJ6 194 aaKnown RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 C1QTNF6Q9BXI9 259 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 MTHFD2LQ9H903 347 aaPredicted RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 ZDHHC4Q9NPG8 344 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 CAMK2AQ9UQM7 478 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 AK6Q9Y3D8 172 aaKnown RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 GMDSO60547 372 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 SAGP10523 405 aaPredicted RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 NRG3P56975 720 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 ERVK-21P61565 698 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 MLF2Q15773 248 aaPredicted RBP21.88■■□□□ 1.09
TSKU-201ENST00000333090 RFLNBQ8N5W9 214 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 OR7G2Q8NG99 324 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 TMEM239Q8WW34 195 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 ABRACLQ9P1F3 81 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 RPS6KB2Q9UBS0 482 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 SPATA2Q9UM82 520 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 SCN3AQ9NY46 2000 aa21.88■■□□□ 1.09
TSKU-201ENST00000333090 PRRT4C9JH25 899 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 TSPAN4O14817 238 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 ADH1AP07327 375 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 CLTBP09497 229 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 CDK3Q00526 305 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 PLPP4Q5VZY2 271 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 Q6ZTK2 550 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 PEX11GQ96HA9 241 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 INSM2Q96T92 566 aaPredicted RBP21.87■■□□□ 1.09
TSKU-201ENST00000333090 LYARQ9NX58 379 aaKnown RBP21.87■■□□□ 1.09
TSKU-201ENST00000333090 CLDND1Q9NY35 253 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 HCN3Q9P1Z3 774 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 RCE1Q9Y256 329 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 FKBP7Q9Y680 259 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 TRAPPC13A5PLN9 417 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 DUXAA6NLW8 204 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 STX11O75558 287 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 VEGFCP49767 419 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 RAB28P51157 221 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 CAMK1Q14012 370 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 CRMP1Q14194 572 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 TP53I3Q53FA7 332 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 MFSD12Q6NUT3 480 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 RANBP3LQ86VV4 465 aaPredicted RBP21.87■■□□□ 1.09
TSKU-201ENST00000333090 ADGRG3Q86Y34 549 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 SMIM4Q8WVI0 70 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 OR10A4Q9H209 315 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 ZNF223Q9UK11 482 aaPredicted RBP21.87■■□□□ 1.09
TSKU-201ENST00000333090 NPTNQ9Y639 398 aa21.87■■□□□ 1.09
TSKU-201ENST00000333090 TRAV27A0A087WT01 109 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 HYAL3O43820 417 aaPredicted RBP21.86■■□□□ 1.09
TSKU-201ENST00000333090 RHOP08100 348 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 ADRB1P08588 477 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 HTR2AP28223 471 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 HCCSP53701 268 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 DYRK1AQ13627 763 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 FAAH2Q6GMR7 532 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 HEPHL1Q6MZM0 1159 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 LINGO2Q7L985 606 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 PRSS42Q7Z5A4 293 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 CMIPQ8IY22 773 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 OR51A7Q8NH64 312 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 LGALS14Q8TCE9 139 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 WDR26Q9H7D7 661 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 SYNPO2LQ9H987 977 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 SCML1Q9UN30 329 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 SNRNP200O75643 2136 aaKnown RBP21.86■■□□□ 1.09
TSKU-201ENST00000333090 RIIAD1A6NNX1 92 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 TCTE1Q5JU00 501 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 TMIEQ8NEW7 156 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 OR11G2Q8NGC1 345 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 OR2T4Q8NH00 348 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 SLC6A20Q9NP91 592 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 RCBTB2O95199 551 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 ASPGQ86U10 573 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 GPAT4Q86UL3 456 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 CACUL1Q86Y37 369 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 SLITRK4Q8IW52 837 aa21.86■■□□□ 1.09
TSKU-201ENST00000333090 ALDOBP05062 364 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 KRT33BQ14525 404 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 HNRNPA1L2Q32P51 320 aaKnown RBP21.85■■□□□ 1.09
TSKU-201ENST00000333090 TMEM255AQ5JRV8 349 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 TEX19Q8NA77 164 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 DOK4Q8TEW6 326 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms