RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SDC2P34741 201 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 RBM34P42696 430 aaKnown RBP16.03■□□□□ 0.16
DDX28-201ENST00000332395 HNRNPKP61978 463 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX28-201ENST00000332395 PSPHP78330 225 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 FUT7Q11130 342 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 DESI1Q6ICB0 168 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 LAX1Q8IWV1 398 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 SYT14Q8NB59 555 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 MED18Q9BUE0 208 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 PCED1AQ9H1Q7 454 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 MRPS17Q9Y2R5 130 aaKnown RBP16.03■□□□□ 0.16
DDX28-201ENST00000332395 OR10H1Q9Y4A9 318 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 FGF9P31371 208 aaPredicted RBP16.03■□□□□ 0.16
DDX28-201ENST00000332395 SLC9A3P48764 834 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 ATP12AP54707 1039 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
DDX28-201ENST00000332395 NKAIN2Q5VXU1 208 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 ZNF322Q6U7Q0 402 aaPredicted RBP16.03■□□□□ 0.16
DDX28-201ENST00000332395 ZNF550Q7Z398 422 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 GATAD2AQ86YP4 633 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 CADM2Q8N3J6 435 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 HSPA12BQ96MM6 686 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 CCDC32Q9BV29 185 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 NDEL1Q9GZM8 345 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 GSTK1Q9Y2Q3 226 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 FITM1A5D6W6 292 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 ANKRD34BA5PLL1 514 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 H0YIG0 161 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 CELP19835 753 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 CD1CP29017 333 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 PSMD4P55036 377 aaKnown RBP16.02■□□□□ 0.16
DDX28-201ENST00000332395 NXPH1P58417 271 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 COPZ1P61923 177 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 ZSWIM7Q19AV6 140 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 C14orf28Q4W4Y0 310 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 KLHL12Q53G59 568 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 TMPRSS11AQ6ZMR5 421 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 OAFQ86UD1 273 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 ACBD7Q8N6N7 88 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 BCORP1Q8N888 145 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 ZNF615Q8N8J6 731 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 SLC37A3Q8NCC5 494 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 KISS1RQ969F8 398 aaPredicted RBP16.02■□□□□ 0.16
DDX28-201ENST00000332395 WDFY2Q96P53 400 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 LRIT1Q9P2V4 623 aa16.02■□□□□ 0.16
DDX28-201ENST00000332395 PLEKHB1Q9UF11 243 aaPredicted RBP16.02■□□□□ 0.16
DDX28-201ENST00000332395 TRDV1A0A1B0GX56 115 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 C12orf71A8MTZ7 269 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 PRR23D1E9PI22 279 aaPredicted RBP16.02■□□□□ 0.15
DDX28-201ENST00000332395 PRR23D2P0DMB1 279 aaPredicted RBP16.02■□□□□ 0.15
DDX28-201ENST00000332395 DBPQ10586 325 aaPredicted RBP16.02■□□□□ 0.15
DDX28-201ENST00000332395 FCRLBQ6BAA4 426 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 ULK3Q6PHR2 472 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 OGFOD3Q6PK18 319 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 KIRREL2Q6UWL6 708 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 LILRB4Q8NHJ6 448 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 PTP4A1Q93096 173 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 ZDHHC12Q96GR4 267 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 KATNB1Q9BVA0 655 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 TMED9Q9BVK6 235 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 CHRNA10Q9GZZ6 450 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 UCKL1Q9NWZ5 548 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 EPHA6Q9UF33 1036 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 TRAPPC4Q9Y296 219 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 SLC35A3Q9Y2D2 325 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 CMAHPQ9Y471 501 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 MAU2Q9Y6X3 613 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 V9GYH0 126 aa16.02■□□□□ 0.15
DDX28-201ENST00000332395 PCDH15Q96QU1 1955 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.01■□□□□ 0.15
DDX28-201ENST00000332395 SLC35F4A4IF30 521 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 RIIAD1A6NNX1 92 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 RHPN2P1A8MT19 583 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 PPP1R3DO95685 299 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 CLPSP04118 112 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 CRYZQ08257 329 aaKnown RBP16.01■□□□□ 0.15
DDX28-201ENST00000332395 SERTAD2Q14140 314 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 KCNAB1Q14722 419 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 GRM7Q14831 915 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 NDUFAF6Q330K2 333 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 ARMC4Q5T2S8 1044 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 LINC00114Q6XXX2 140 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 KLBQ86Z14 1044 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 CMIPQ8IY22 773 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 ARIH2OSQ8N7S6 290 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 OR4C3Q8NH37 302 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 OR4C6Q8NH72 309 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 TP53INP1Q96A56 240 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 TNFRSF13CQ96RJ3 184 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 RAB33BQ9H082 229 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 TBC1D17Q9HA65 648 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 C14orf119Q9NWQ9 140 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 RPS6KB2Q9UBS0 482 aa16.01■□□□□ 0.15
DDX28-201ENST00000332395 SLC22A31A6NKX4 558 aa16■□□□□ 0.15
DDX28-201ENST00000332395 CSTAP01040 98 aa16■□□□□ 0.15
DDX28-201ENST00000332395 RPS7P62081 194 aaKnown RBP16■□□□□ 0.15
DDX28-201ENST00000332395 KRR1Q13601 381 aaKnown RBP16■□□□□ 0.15
DDX28-201ENST00000332395 FHL1Q13642 323 aa16■□□□□ 0.15
DDX28-201ENST00000332395 RTL4Q6ZR62 310 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms