RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
TPM3-205ENST00000328159 CLEC2DQ9UHP7 191 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 ICAM5Q9UMF0 924 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 LSM2Q9Y333 95 aaKnown RBP13.7□□□□□ -0.22
TPM3-205ENST00000328159 TRAV27A0A087WT01 109 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 VSTM2BA6NLU5 285 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 GNB5O14775 395 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 ZNF264O43296 627 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 SLC2A10O95528 541 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 MPLP40238 635 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 MTNR1AP48039 350 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 EMP2P54851 167 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 CRYZQ08257 329 aaKnown RBP13.69□□□□□ -0.22
TPM3-205ENST00000328159 RAB40BQ12829 278 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 IL11RAQ14626 422 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 WBP2NLQ6ICG8 309 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 THSD4Q6ZMP0 1018 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 LNX2Q8N448 690 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 TMCO5AQ8N6Q1 288 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 NANOGP1Q8N7R0 232 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 C17orf47Q8NEP4 570 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 NFAM1Q8NET5 270 aaPredicted RBP13.69□□□□□ -0.22
TPM3-205ENST00000328159 OR51A7Q8NH64 312 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 NDNFQ8TB73 568 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 RFKQ969G6 155 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 OMA1Q96E52 524 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 CTRCQ99895 268 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 MND1Q9BWT6 205 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 ARRDC1-AS1Q9H2J1 176 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 CARD8Q9Y2G2 431 aa13.69□□□□□ -0.22
TPM3-205ENST00000328159 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 SAGE2PA6NJ88 616 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 AIREO43918 545 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 GADD45AP24522 165 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 ABCD3P28288 659 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 RGS6P49758 472 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CCR4P51679 360 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CDH11P55287 796 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 NCS1P62166 190 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 PSPHP78330 225 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 ZFP36L1Q07352 338 aaKnown RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 C3orf38Q5JPI3 329 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 NXNL2Q5VZ03 156 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 TCEAL6Q6IPX3 200 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CBLN3Q6UW01 205 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 OAFQ86UD1 273 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 AGBL5Q8NDL9 886 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 TBC1D15Q8TC07 691 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 TCEAL3Q969E4 200 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 SGTBQ96EQ0 304 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CCNL2Q96S94 520 aaPredicted RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 MESP1Q9BRJ9 268 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 IFT27Q9BW83 186 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 SEMA4CQ9C0C4 833 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 LAT2Q9GZY6 243 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 HINT3Q9NQE9 182 aaKnown RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 M0R3G1 203 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CSO75390 466 aaKnown RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 LDOC1O95751 146 aaPredicted RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 GRK6P43250 576 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 PNLIPRP2P54317 469 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 RNF4P78317 190 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 DOC2BQ14184 412 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 ANGPT1Q15389 498 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 TSTQ16762 297 aaKnown RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 LCN10Q6JVE6 187 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CXXC5Q7LFL8 322 aaKnown RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 SLCO6A1Q86UG4 719 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 CPOQ8IVL8 374 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 AMER2Q8N7J2 671 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 PROKR2Q8NFJ6 384 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 RACGAP1Q9H0H5 632 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 SLC26A1Q9H2B4 701 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 FN3KQ9H479 309 aa13.68□□□□□ -0.22
TPM3-205ENST00000328159 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
TPM3-205ENST00000328159 A0A1W2PQD3 144 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 FAM86C2PA6NEL3 165 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 MEN1O00255 615 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 MYL12BO14950 172 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
TPM3-205ENST00000328159 FOXD2O60548 495 aaPredicted RBP13.67□□□□□ -0.22
TPM3-205ENST00000328159 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
TPM3-205ENST00000328159 PPM1BO75688 479 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 ZNF883P0CG24 379 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 PNMTP11086 282 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 ETV5P41161 510 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 CLK1P49759 484 aaKnown RBP13.67□□□□□ -0.22
TPM3-205ENST00000328159 ETV1P50549 477 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 FHL1Q13642 323 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 SPHARQ15513 63 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 PAQR6Q6TCH4 344 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 ATG4DQ86TL0 474 aaPredicted RBP13.67□□□□□ -0.22
TPM3-205ENST00000328159 SLC43A2Q8N370 569 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 BMPERQ8N8U9 685 aa13.67□□□□□ -0.22
TPM3-205ENST00000328159 APCDD1LQ8NCL9 501 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms