RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 B4DXG7 233 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 FADS1O60427 444 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 SEC14L2O76054 403 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 STK17BO94768 372 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 SLC2A10O95528 541 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 PCYT1AP49585 367 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 PNLIPRP2P54317 469 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 TCF15Q12870 199 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 PCOLCEQ15113 449 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 GPR107Q5VW38 600 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 SLC27A4Q6P1M0 643 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 DHRS13Q6UX07 377 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 THSD4Q6ZMP0 1018 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 MRGPREQ86SM8 312 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 MUL1Q969V5 352 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 VMP1Q96GC9 406 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 GPN3Q9UHW5 284 aaPredicted RBP16.85■□□□□ 0.29
USP39-201ENST00000323701 MRTO4Q9UKD2 239 aaKnown RBP16.85■□□□□ 0.29
USP39-201ENST00000323701 MED31Q9Y3C7 131 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 NPFFR2Q9Y5X5 522 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 TRAV27A0A087WT01 109 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 UNC119BA6NIH7 251 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 GTPBP1O00178 669 aaKnown RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 NADKO95544 446 aaPredicted RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 SMSP52788 366 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 DOC2BQ14184 412 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 DCAF12Q5T6F0 453 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 CDCP2Q5VXM1 449 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 CCDC81Q6ZN84 652 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 TMPRSS11FQ6ZWK6 438 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 PRSS48Q7RTY5 328 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 OR8J1Q8NGP2 316 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 POLDIP3Q9BY77 421 aaKnown RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 EVA1AQ9H8M9 152 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 TBC1D23Q9NUY8 699 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 CDH10Q9Y6N8 788 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 MUC6Q6W4X9 2439 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 EXPH5Q8NEV8 1989 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 IGKV1D-42A0A075B6H8 117 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 C2orf72A6NCS6 295 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 ALG1L2C9J202 215 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 SCO2O43819 266 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 CSO75390 466 aaKnown RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 SLC15A1P46059 708 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 CTBP2P56545 445 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 RPS18P62269 152 aaKnown RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 TEKQ02763 1124 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 ST3GAL4Q11206 333 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 SNAPC1Q16533 368 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 ZSWIM7Q19AV6 140 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 SYT14P1Q58G82 188 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 TMEM201Q5SNT2 666 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 LRRC17Q8N6Y2 441 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 IPCEF1Q8WWN9 437 aaPredicted RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 TP53INP1Q96A56 240 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 OR52D1Q9H346 318 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 HHATLQ9HCP6 504 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 ACOT13Q9NPJ3 140 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 CLN6Q9NWW5 311 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 RPS6KB2Q9UBS0 482 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 RSL24D1Q9UHA3 163 aaKnown RBP16.84■□□□□ 0.29
USP39-201ENST00000323701 HS3ST3B1Q9Y662 390 aa16.84■□□□□ 0.29
USP39-201ENST00000323701 SDK2Q58EX2 2172 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 A0A087WUJ7 227 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 TMX2-CTNND1H3BSU7 103 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 HCRTR2O43614 444 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 MPZL2O60487 215 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 LCKP06239 509 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 TGM1P22735 817 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 EVI2BP34910 448 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 CSNK2BP67870 215 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 CRYZQ08257 329 aaKnown RBP16.83■□□□□ 0.28
USP39-201ENST00000323701 OR51A7Q8NH64 312 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 NUBPLQ8TB37 319 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 LRR1Q96L50 414 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 DEPDC7Q96QD5 511 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 UBQLN3Q9H347 655 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 SIGLEC7Q9Y286 467 aa16.83■□□□□ 0.28
USP39-201ENST00000323701 RIF1Q5UIP0 2472 aaKnown RBP16.83■□□□□ 0.28
USP39-201ENST00000323701 LOC102723996A0A087X1L8 192 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 PRR33A8MZF0 331 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 C9orf172C9J069 976 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 NDUFB5O43674 189 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 CDK1P06493 297 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 SAGP10523 405 aaPredicted RBP16.82■□□□□ 0.28
USP39-201ENST00000323701 ACVR2AP27037 513 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 BICRALQ6AI39 1079 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 FAM26EQ8N5C1 309 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 FANK1Q8TC84 345 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 TRUB1Q8WWH5 349 aaKnown RBP16.82■□□□□ 0.28
USP39-201ENST00000323701 ISOC1Q96CN7 298 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 EXOSC3Q9NQT5 275 aaKnown RBP16.82■□□□□ 0.28
USP39-201ENST00000323701 FAM86C1Q9NVL1 165 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 NXT1Q9UKK6 140 aaKnown RBP16.82■□□□□ 0.28
USP39-201ENST00000323701 ICAM5Q9UMF0 924 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 HRH3Q9Y5N1 445 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 CUL9Q8IWT3 2517 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 IGHV1-45A0A0A0MS14 117 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
USP39-201ENST00000323701 PTP4A3O75365 173 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms