RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 TESMINQ9Y4I5 508 aa12.37□□□□□ -0.43
PRPF18-201ENST00000320054 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 C7orf72A4D263 438 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 CHP2O43745 196 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 CDC40O60508 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 THY1P04216 161 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 PNMTP11086 282 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 GP1BBP13224 206 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 PRKCAP17252 672 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 MST1P26927 711 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 DNAJA1P31689 397 aaKnown RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 HTR3AP46098 478 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 LIMS1P48059 325 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 ZNF41P51814 821 aaPredicted RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 CDH12P55289 794 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 DSCR4P56555 118 aaPredicted RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 SESN3P58005 492 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 GPR85P60893 370 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 KCNAB2Q13303 367 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 GLYR1Q49A26 553 aaPredicted RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 LINC00114Q6XXX2 140 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 Q6ZS92 163 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 GRINAQ7Z429 371 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 CADM2Q8N3J6 435 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 ZFP62Q8NB50 900 aaPredicted RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 OR4C15Q8NGM1 316 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 SLC38A4Q969I6 547 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 C3orf49Q96BT1 292 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 NRBF2Q96F24 287 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 ABHD17AQ96GS6 310 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 MPP4Q96JB8 637 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 GNRHR2Q96P88 292 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 FUZQ9BT04 418 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 RASSF4Q9H2L5 321 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 UBQLN3Q9H347 655 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 CTPS2Q9NRF8 586 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 MAN2C1Q9NTJ4 1040 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 MED17Q9NVC6 651 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 VNN3Q9NY84 501 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 SELENONQ9NZV5 590 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 ZMIZ1Q9ULJ6 1067 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 SAMHD1Q9Y3Z3 626 aaKnown RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 CSAG2Q9Y5P2 127 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 LYVE1Q9Y5Y7 322 aa12.36□□□□□ -0.43
PRPF18-201ENST00000320054 MAP1BP46821 2468 aaKnown RBP12.36□□□□□ -0.43
PRPF18-201ENST00000320054 PKD1L2Q7Z442 2459 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 TPRP12270 2363 aaKnown RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 ITPR1Q14643 2758 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 TNFRSF11BO00300 401 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 CASQ2O14958 399 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 GMFGO60234 142 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 GLSO94925 669 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 NTN1O95631 604 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 PDGFAP04085 211 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 FPR1P21462 350 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 DPP4P27487 766 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 SRD5A2P31213 254 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 EIF1P41567 113 aaKnown RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 CD97P48960 835 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 MEOX1P50221 254 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 ZNF169Q14929 603 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 TOMM34Q15785 309 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 PLPPR5Q32ZL2 321 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 ALG10BQ5I7T1 473 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 ATG4DQ86TL0 474 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 SVOPLQ8N434 492 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 FAM98AQ8NCA5 519 aaKnown RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 OR5K1Q8NHB7 308 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 ZBTB8AQ96BR9 441 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 ZNF524Q96C55 264 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 MRGPRX4Q96LA9 322 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 JSRP1Q96MG2 331 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-201ENST00000320054 PRSS27Q9BQR3 290 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 SEMA6AQ9H2E6 1030 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 B4GALT7Q9UBV7 327 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 SLC7A7Q9UM01 511 aa12.35□□□□□ -0.43
PRPF18-201ENST00000320054 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 A0A087WUJ7 227 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 E2F6O75461 281 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ADH6P28332 368 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 TACR3P29371 465 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 RBM34P42696 430 aaKnown RBP12.34□□□□□ -0.43
PRPF18-201ENST00000320054 POLR2HP52434 150 aaKnown RBP12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 EXOC3L2Q2M3D2 409 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 TMEM44Q2T9K0 475 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 FBXW10Q5XX13 1052 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 RPUSD3Q6P087 351 aaKnown RBP12.34□□□□□ -0.43
PRPF18-201ENST00000320054 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ARSKQ6UWY0 536 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 LINC00471Q8N535 108 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 RBMXL3Q8N7X1 1067 aaKnown RBP12.34□□□□□ -0.43
PRPF18-201ENST00000320054 SLC7A13Q8TCU3 470 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms