RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 HRASLS2Q9NWW9 162 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 COL6A3P12111 3177 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 A0A1W2PRQ8 180 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 C7orf66A4D0T2 115 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ANXA3P12429 323 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 LSSP48449 732 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 TRA2BP62995 288 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 SHC2P98077 582 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 DUSP5Q16690 384 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 KLHL12Q53G59 568 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 C3orf38Q5JPI3 329 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 BICRALQ6AI39 1079 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 KRT74Q7RTS7 529 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 LRRC25Q8N386 305 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 FAM160A2Q8N612 972 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 OR8D4Q8NGM9 314 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 FAM3CQ92520 227 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 FGF11Q92914 225 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 RNFT2Q96EX2 444 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ART5Q96L15 291 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ZNF681Q96N22 645 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 PITHD1Q9GZP4 211 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 OR51J1Q9H342 316 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 BEX1Q9HBH7 125 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 POLMQ9NP87 494 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 WDR45Q9Y484 360 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 CHST2Q9Y4C5 530 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 KCNMB2Q9Y691 235 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC2A10O95528 541 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 PRG2P13727 222 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ATP12AP54707 1039 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 SMIM11AP58511 58 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ENTPD8Q5MY95 495 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 TMEM52Q8NDY8 209 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 OR52H1Q8NGJ2 320 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 TEX47Q8TBZ9 253 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 PRRC1Q96M27 445 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 MCHR1Q99705 422 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ACTR10Q9NZ32 417 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 CYP8B1Q9UNU6 501 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 GABRPO00591 440 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 EEF1E1O43324 174 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 PRKNO60260 465 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 IFNA7P01567 189 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ACSM4P0C7M7 580 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 CELP19835 753 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ATP6V1E1P36543 226 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 NNATQ16517 81 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 NTRK2Q16620 822 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 Q6ZS52 159 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 MORN4Q8NDC4 146 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 OR4K14Q8NGD5 310 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ZFPM2Q8WW38 1151 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 GABRG3Q99928 467 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ARHGAP9Q9BRR9 750 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 MRPL39Q9NYK5 338 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 CSNK1G3Q9Y6M4 447 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ARID1BQ8NFD5 2236 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 CNTRLQ7Z7A1 2325 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 A0A0G2JPF8 293 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 TRDV1A0A1B0GX56 115 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 HNRNPCL2B2RXH8 293 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 HNRNPCL3B7ZW38 293 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 H0YGG7 62 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 KHNYNO15037 678 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 SERPINI2O75830 405 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 HNRNPCL4P0DMR1 293 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 HNRNPA2B1P22626 353 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ANXA11P50995 505 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ARF3P61204 181 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ILF3Q12906 894 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 RNASE12Q5GAN4 147 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 TAF8Q7Z7C8 310 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 GPR135Q8IZ08 494 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 GAS2L1Q99501 681 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 REG4Q9BYZ8 158 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 CLEC4MQ9H2X3 399 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 MCCC2Q9HCC0 563 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 PPIEQ9UNP9 301 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 HEBP2Q9Y5Z4 205 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 ASXL3Q9C0F0 2248 aa14.41□□□□□ -0.1
SHROOM1-201ENST00000319854 TEX13CA0A0J9YWL9 993 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 A0A1W2PPL8 197 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 PEX12O00623 359 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 GNB5O14775 395 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 EIF4EP06730 217 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 FCER2P06734 321 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 IDNKQ5T6J7 187 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 CDC73Q6P1J9 531 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 METTL27Q8N6F8 245 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ZNF485Q8NCK3 441 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 OR2A5Q96R48 311 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 POLDIP3Q9BY77 421 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ACTRT3Q9BYD9 372 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 KLF15Q9UIH9 416 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 CD207Q9UJ71 328 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 G3V3Q6 166 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 B3GALT2O43825 422 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 DHFRP00374 187 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms