RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 AHRP35869 848 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CD200P41217 278 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 WNT3P56703 355 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PCBP3P57721 371 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CXADRP78310 365 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EGR3Q06889 387 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 LMAN2Q12907 356 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 MLC1Q15049 377 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 OCLNQ16625 522 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SLC30A6Q6NXT4 461 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CDC73Q6P1J9 531 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 C11orf88Q6PI97 169 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 B3GLCTQ6Y288 498 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 Q6ZTK2 550 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 THOC6Q86W42 341 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PTOV1Q86YD1 416 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PHACTR4Q8IZ21 702 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NEK7Q8TDX7 302 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 XAGE5Q8WWM1 108 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NDRG1Q92597 394 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 VOPP1Q96AW1 172 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 F2RL3Q96RI0 385 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SLC32A1Q9H598 525 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PARD6AQ9NPB6 346 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CA10Q9NS85 328 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 FXYD6-FXYD2A0A087WZ82 144 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TRAPPC13A5PLN9 417 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 A8MWP6 167 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ANKRD66B4E2M5 251 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 J3KR12 359 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PRRG1O14668 218 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CASKO14936 926 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PRAF2O60831 178 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NDUFS3O75489 264 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 AK1P00568 194 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 INHAP05111 366 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SERPINA5P05154 406 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CTSHP09668 335 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF888P0CJ79 500 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 C1GALT1C1LP0DN25 315 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CD46P15529 392 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF7P17097 686 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ACRV1P26436 265 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TACR3P29371 465 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EPHB3P54753 998 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 RPS14P62263 151 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SIM1P81133 766 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 MRPS10P82664 201 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EFNB1P98172 346 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TRA2AQ13595 282 aaKnown RBP eCLIP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SLBPQ14493 270 aaKnown RBP eCLIP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF630Q2M218 657 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 RIPPLY2Q5TAB7 128 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 DMRTA1Q5VZB9 504 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CD200R1LQ6Q8B3 271 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TECPR1Q7Z6L1 1165 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 RANBP3LQ86VV4 465 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TPRA1Q86W33 373 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NPAS3Q8IXF0 933 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 OR10A7Q8NGE5 316 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 OR1S2Q8NGQ3 325 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 DNAJB3Q8WWF6 145 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ACOT12Q8WYK0 555 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM203Q969S6 136 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PSMG2Q969U7 264 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 C5orf34Q96MH7 638 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CLCC1Q96S66 551 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 TEAD3Q99594 435 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GPR21Q99679 349 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SEMA3CQ99985 751 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 FXYD6Q9H0Q3 95 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 IKZF5Q9H5V7 419 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ELP3Q9H9T3 547 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CLEC2DQ9UHP7 191 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GDF2Q9UK05 429 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ST3GAL5Q9UNP4 418 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GPR55Q9Y2T6 319 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PCDHB11Q9Y5F2 797 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NPEPPSL1A6NEC2 478 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 H7C4K7 107 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 M0R129 80 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 SLC28A2O43868 658 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OR2A4O95047 310 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 NXPH2O95156 264 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 KCNK5O95279 499 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 PAPLNO95428 1278 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF682O95780 498 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 GKN3PP0CG01 181 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ELK1P19419 428 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 SDHBP21912 280 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 PPP2R1BP30154 601 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 BDKRB2P30411 391 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 FRKP42685 505 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OR2B8PP59922 312 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 PSMA6P60900 246 aaKnown RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 CACNB2Q08289 660 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 NFATC2Q13469 925 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 C1DQ13901 141 aaKnown RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 RBM39Q14498 530 aaKnown RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 SLC36A2Q495M3 483 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms