RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NUDT1P36639 197 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 SLC9A3P48764 834 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 GPR50Q13585 617 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 NCF4Q15080 339 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 BAK1Q16611 211 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 CT45A2Q5DJT8 189 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 FAM209AQ5JX71 171 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 EXOSC6Q5RKV6 272 aaKnown RBP11.46□□□□□ -0.58
RNF4-201ENST00000314289 SLC36A4Q6YBV0 504 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 LAX1Q8IWV1 398 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 GJD3Q8N144 294 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 NANOGP1Q8N7R0 232 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 CYB561A3Q8NBI2 242 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 C9orf43Q8TAL5 461 aaPredicted RBP11.46□□□□□ -0.58
RNF4-201ENST00000314289 TM9SF4Q92544 642 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 TMCO6Q96DC7 493 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 MESP1Q9BRJ9 268 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 UBQLN3Q9H347 655 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.58
RNF4-201ENST00000314289 HINT3Q9NQE9 182 aaKnown RBP11.46□□□□□ -0.58
RNF4-201ENST00000314289 IL20Q9NYY1 176 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 A0A1B0GWA3 101 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 LILRA5A6NI73 299 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CENPBD1B2RD01 187 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 KLF4O43474 513 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 RAB36O95755 333 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 FOLR1P15328 257 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CD83Q01151 205 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 KLHL12Q53G59 568 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 FAAH2Q6GMR7 532 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 FANK1Q8TC84 345 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 UBASH3BQ8TF42 649 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 BPIFA2Q96DR5 249 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 MND1Q9BWT6 205 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 RACGAP1Q9H0H5 632 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 SNTG1Q9NSN8 517 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 TESQ9UGI8 421 aaKnown RBP11.45□□□□□ -0.58
RNF4-201ENST00000314289 NUFIP1Q9UHK0 495 aaKnown RBP11.45□□□□□ -0.58
RNF4-201ENST00000314289 ATXN7L1Q9ULK2 861 aaPredicted RBP11.45□□□□□ -0.58
RNF4-201ENST00000314289 MEIOCA2RUB1 952 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 PRODHO43272 600 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 GYPBP06028 91 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CLUP10909 449 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CSF2RBP32927 897 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 GPR3P46089 330 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CXCL12P48061 93 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 RFX2P48378 723 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 EFNA3P52797 238 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 GAS1P54826 345 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 PGGHGQ32M88 737 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 ZNF791Q3KP31 576 aaPredicted RBP11.45□□□□□ -0.58
RNF4-201ENST00000314289 OR2T33Q8NG76 320 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CHAC2Q8WUX2 184 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 OSTF1Q92882 214 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 GAL3ST4Q96RP7 486 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 TM9SF2Q99805 663 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 NUDT22Q9BRQ3 303 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CCDC32Q9BV29 185 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 ASPNQ9BXN1 380 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 CUTCQ9NTM9 273 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 FBXL4Q9UKA2 621 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 FER1L5A0AVI2 2057 aa11.45□□□□□ -0.58
RNF4-201ENST00000314289 IGHV1OR21-1A0A087WYE8 117 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 A0A1W2PQ09 198 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 UNC119BA6NIH7 251 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 SNX4O95219 450 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 LYPD3O95274 346 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 PDGFBP01127 241 aaPredicted RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 SCG5P05408 212 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 MYL12AP19105 171 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 STAT5AP42229 794 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CCR4P51679 360 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 INSL4Q14641 139 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 LAPTM4BQ86VI4 370 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 ZNF595Q8IYB9 648 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 LRRC17Q8N6Y2 441 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 OR51G2Q8NGK0 314 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 OR9Q1Q8NGQ5 310 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 ZDHHC12Q96GR4 267 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CD180Q99467 661 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 IFT27Q9BW83 186 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 TAPBPLQ9BX59 468 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 SYNDIG1Q9H7V2 258 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 DNAJB12Q9NXW2 375 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 NPAP1Q9NZP6 1156 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CRNNQ9UBG3 495 aaPredicted RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 WNT16Q9UBV4 365 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 NCOR1O75376 2440 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CNTRLQ7Z7A1 2325 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 PLD2O14939 933 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 LALBAP00709 142 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 RPS19P39019 145 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 AFF3P51826 1226 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 ALG10BQ5I7T1 473 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 MEDAGQ5VYS4 303 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 TMPRSS11AQ6ZMR5 421 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 PHC2Q8IXK0 858 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms