RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 BRIX1Q8TDN6 353 aaKnown RBP20.57■□□□□ 0.88
IRF3-201ENST00000309877 RNF138Q8WVD3 245 aa20.57■□□□□ 0.88
IRF3-201ENST00000309877 THOC3Q96J01 351 aaKnown RBP20.57■□□□□ 0.88
IRF3-201ENST00000309877 CCNL2Q96S94 520 aaPredicted RBP20.57■□□□□ 0.88
IRF3-201ENST00000309877 TMEM5Q9Y2B1 443 aa20.57■□□□□ 0.88
IRF3-201ENST00000309877 HSPE1-MOB4S4R3N1 261 aa20.57■□□□□ 0.88
IRF3-201ENST00000309877 FAM186AA6NE01 2351 aa20.57■□□□□ 0.88
IRF3-201ENST00000309877 A0A087WUJ7 227 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 DCDC2BA2VCK2 349 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 ELOA3DA6NLF2 546 aaPredicted RBP20.56■□□□□ 0.88
IRF3-201ENST00000309877 ADAM10O14672 748 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 GNB5O14775 395 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 PNMTP11086 282 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 GAS1P54826 345 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 RTP5Q14D33 572 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 PTGES3Q15185 160 aaKnown RBP20.56■□□□□ 0.88
IRF3-201ENST00000309877 COL28A1Q2UY09 1125 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 ELOA3BQ3SY89 546 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 DCAF10Q5QP82 559 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 JMJD6Q6NYC1 403 aaPredicted RBP20.56■□□□□ 0.88
IRF3-201ENST00000309877 LINC00114Q6XXX2 140 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 ELOA3Q8NG57 546 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 HPF1Q9NWY4 346 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 MYRFQ9Y2G1 1151 aa20.56■□□□□ 0.88
IRF3-201ENST00000309877 E9PQ18 207 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 GP1BBP13224 206 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 GGT2P36268 569 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 CASP3P42574 277 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 CAMK2BQ13554 666 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 OR5M10Q6IEU7 315 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 FER1L6-AS2Q96M78 137 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 SECISBP2Q96T21 854 aaKnown RBP20.55■□□□□ 0.88
IRF3-201ENST00000309877 KLHDC3Q9BQ90 382 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 ZNF426Q9BUY5 554 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 ATP13A2Q9NQ11 1180 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 PPP4R1LQ9P1A2 415 aa20.55■□□□□ 0.88
IRF3-201ENST00000309877 IGFBP1P08833 259 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 NUP107P57740 925 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 ISL1P61371 349 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 MEP1AQ16819 746 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 ACER2Q5QJU3 275 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 B3GNTL1Q67FW5 361 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 RASSF6Q6ZTQ3 369 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 ATG4DQ86TL0 474 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 FAM81AQ8TBF8 368 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 GPR119Q8TDV5 335 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 BPIFA2Q96DR5 249 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 HHATLQ9HCP6 504 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 C20orf141Q9NUB4 165 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 WIF1Q9Y5W5 379 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 CHCHD2Q9Y6H1 151 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 ZAR1LA6NP61 321 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 KLF4O43474 513 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 SDHBP21912 280 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 TACR3P29371 465 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 PTGDSP41222 190 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 SUMO3P55854 103 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 CTBP2P56545 445 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 CD47Q08722 323 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 AIMP2Q13155 320 aaKnown RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 SNTA1Q13424 505 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 TOMM34Q15785 309 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 TMEM236Q5W0B7 351 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 VASH2Q86V25 355 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 DEPDC4Q8N2C3 294 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 DPH1Q9BZG8 443 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 ADAM19Q9H013 955 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 DSN1Q9H410 356 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 MEPEQ9NQ76 525 aaPredicted RBP20.54■□□□□ 0.88
IRF3-201ENST00000309877 TAS2R10Q9NYW0 307 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 SCOCQ9UIL1 159 aa20.54■□□□□ 0.88
IRF3-201ENST00000309877 AHCTF1Q8WYP5 2266 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 DMXL1Q9Y485 3027 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 ANKUB1A6NFN9 424 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 UNC119BA6NIH7 251 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 TP53P04637 393 aaPredicted RBP20.53■□□□□ 0.88
IRF3-201ENST00000309877 ITGA3P26006 1051 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 MST1P26927 711 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 MSX1P28360 303 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 CDC42P60953 191 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 CRYZQ08257 329 aaKnown RBP20.53■□□□□ 0.88
IRF3-201ENST00000309877 QPRTQ15274 297 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 P3H2Q8IVL5 708 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 CLEC1AQ8NC01 280 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 TEX47Q8TBZ9 253 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 C12orf10Q9HB07 376 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 MED11Q9P086 117 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 TEKT2Q9UIF3 430 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 PCSK5Q92824 1860 aa20.53■□□□□ 0.88
IRF3-201ENST00000309877 TRABD2BA6NFA1 517 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 CDC40O60508 579 aaKnown RBP eCLIP20.52■□□□□ 0.88
IRF3-201ENST00000309877 SAGP10523 405 aaPredicted RBP20.52■□□□□ 0.88
IRF3-201ENST00000309877 MAKP20794 623 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 CXCR1P25024 350 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 ELK4P28324 431 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 SLC30A6Q6NXT4 461 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 TMPRSS11FQ6ZWK6 438 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 LSRQ86X29 649 aaPredicted RBP20.52■□□□□ 0.88
IRF3-201ENST00000309877 KIF18BQ86Y91 864 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 CCDC71Q8IV32 467 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms