RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 RAB40BQ12829 278 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 DESI1Q6ICB0 168 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 NANOGP1Q8N7R0 232 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 RFKQ969G6 155 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 DTNBP1Q96EV8 351 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 HSPBAP1Q96EW2 488 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 PLGRKTQ9HBL7 147 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 CARD8Q9Y2G2 431 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 LSM2Q9Y333 95 aaKnown RBP19.5■□□□□ 0.71
ATG4D-201ENST00000309469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.49■□□□□ 0.71
ATG4D-201ENST00000309469 VSTM2BA6NLU5 285 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 GNB5O14775 395 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 ICOSLGO75144 302 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 ALOX12BO75342 701 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 FGF5P12034 268 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 GADD45AP24522 165 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 MTNR1AP48039 350 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 PLCXD2Q0VAA5 305 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 CBLN3Q6UW01 205 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 THSD4Q6ZMP0 1018 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 OAFQ86UD1 273 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 LNX2Q8N448 690 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 PROKR2Q8NFJ6 384 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 OR51A7Q8NH64 312 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 NDNFQ8TB73 568 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 C3orf49Q96BT1 292 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 CTRCQ99895 268 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 MND1Q9BWT6 205 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 FGF20Q9NP95 211 aaPredicted RBP19.49■□□□□ 0.71
ATG4D-201ENST00000309469 ICAM5Q9UMF0 924 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 TRAV27A0A087WT01 109 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 M0R3G1 203 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 AIREO43918 545 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 CDH11P55287 796 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 TRA2AQ13595 282 aaKnown RBP eCLIP19.49■□□□□ 0.71
ATG4D-201ENST00000309469 IL11RAQ14626 422 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 MOGQ16653 247 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 WBP2NLQ6ICG8 309 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 ZBTB46Q86UZ6 589 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 C17orf47Q8NEP4 570 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 OMA1Q96E52 524 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 TNFRSF13CQ96RJ3 184 aa19.49■□□□□ 0.71
ATG4D-201ENST00000309469 A0A1B0GVG6 124 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 CSO75390 466 aaKnown RBP19.48■□□□□ 0.71
ATG4D-201ENST00000309469 EMP2P54851 167 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 DOC2BQ14184 412 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 C3orf38Q5JPI3 329 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 NXNL2Q5VZ03 156 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 AMER2Q8N7J2 671 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 NFAM1Q8NET5 270 aaPredicted RBP19.48■□□□□ 0.71
ATG4D-201ENST00000309469 METTL21AQ8WXB1 218 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 ATOH1Q92858 354 aaPredicted RBP19.48■□□□□ 0.71
ATG4D-201ENST00000309469 IFT27Q9BW83 186 aa19.48■□□□□ 0.71
ATG4D-201ENST00000309469 FER1L5A0AVI2 2057 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 ABCD3P28288 659 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 CLK1P49759 484 aaKnown RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 CCR4P51679 360 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 PNLIPRP2P54317 469 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 RNF4P78317 190 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 ZFP36L1Q07352 338 aaKnown RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 SPHARQ15513 63 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 TSTQ16762 297 aaKnown RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 RTL4Q6ZR62 310 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 CPOQ8IVL8 374 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 TMCO5AQ8N6Q1 288 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 SGTBQ96EQ0 304 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 CCNL2Q96S94 520 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 MESP1Q9BRJ9 268 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 SEMA4CQ9C0C4 833 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 LAT2Q9GZY6 243 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 ARRDC1-AS1Q9H2J1 176 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 OCEL1Q9H607 264 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 HINT3Q9NQE9 182 aaKnown RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 H2AFY2Q9P0M6 372 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 COL5A1P20908 1838 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 SAGE2PA6NJ88 616 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 MEN1O00255 615 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 INHBBP09529 407 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 MPLP40238 635 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 ETV5P41161 510 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 ETV1P50549 477 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 FOXK2Q01167 660 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 FHL1Q13642 323 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 SLC35F1Q5T1Q4 408 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 LCN10Q6JVE6 187 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 PAQR6Q6TCH4 344 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 CXXC5Q7LFL8 322 aaKnown RBP19.47■□□□□ 0.71
ATG4D-201ENST00000309469 AGBL5Q8NDL9 886 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 BBS1Q8NFJ9 593 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 OPALINQ96PE5 141 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 RTN4RQ9BZR6 473 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 RACGAP1Q9H0H5 632 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 FN3KQ9H479 309 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 MCCC2Q9HCC0 563 aa19.47■□□□□ 0.71
ATG4D-201ENST00000309469 FAM86C2PA6NEL3 165 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 MYL12BO14950 172 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 APOL3O95236 402 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 SCG5P05408 212 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 HTR1FP30939 366 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 PSPHP78330 225 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms