RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 EPGNQ6UW88 154 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 ZNF550Q7Z398 422 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 ST8SIA1Q92185 356 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 C7orf26Q96N11 449 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 SLCO1B3Q9NPD5 702 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 GLRX2Q9NS18 164 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 ZIM2Q9NZV7 527 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 CADP27708 2225 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 A0A1W2PNR3 127 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 ENPP1P22413 925 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 CRYGSP22914 178 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 CHI3L1P36222 383 aaPredicted RBP17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 MRPL19P49406 292 aaKnown RBP17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 CCR4P51679 360 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 GTDC1Q4AE62 458 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 PPP4R4Q6NUP7 873 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 STAC2Q6ZMT1 411 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 EIF3MQ7L2H7 374 aaKnown RBP17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 TMCO5AQ8N6Q1 288 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 GOLGA6L1Q8N7Z2 621 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 CPNE4Q96A23 557 aaPredicted RBP17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 MBD6Q96DN6 1003 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 ATP6V1G3Q96LB4 118 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 TRNT1Q96Q11 434 aaKnown RBP17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 PRRG4Q9BZD6 226 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 ACER3Q9NUN7 267 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 C6orf203Q9P0P8 240 aaPredicted RBP17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 NDRG3Q9UGV2 375 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 EMC9Q9Y3B6 208 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 USH1CQ9Y6N9 552 aa17.67■□□□□ 0.42
PDZRN3-202ENST00000308537 C16orf97H3BN30 126 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 SLC22A3O75751 556 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 SYNGR4O95473 234 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 KCNJ10P78508 379 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 LRRC74AQ0VAA2 488 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 GSTA3Q16772 222 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 ATAD3BQ5T9A4 648 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 NXNQ6DKJ4 435 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 LRRC74BQ6ZQY2 392 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 ZNF621Q6ZSS3 439 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 PLEKHM3Q6ZWE6 761 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 HDXQ7Z353 690 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 NUFIP2Q7Z417 695 aaKnown RBP17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 PNPT1Q8TCS8 783 aaKnown RBP17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 CNOT9Q92600 299 aaKnown RBP17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 VPS33AQ96AX1 596 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 CCDC106Q9BWC9 280 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 EXOSC3Q9NQT5 275 aaKnown RBP17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 SLC35A3Q9Y2D2 325 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 DSPPQ9NZW4 1301 aa17.66■□□□□ 0.42
PDZRN3-202ENST00000308537 AGAP5A6NIR3 686 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 SMAD9O15198 467 aaKnown RBP17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 GCM2O75603 506 aaPredicted RBP17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 IL6P05231 212 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 ZCCHC18P0CG32 403 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 CD1EP15812 388 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 EDNRAP25101 427 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 RAC3P60763 192 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 PDSS1Q5T2R2 415 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 TFAP2EQ6VUC0 442 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 DNAJC14Q6Y2X3 702 aaPredicted RBP17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 FCRLAQ7L513 359 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 ATP6V1C2Q8NEY4 427 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 HS3ST6Q96QI5 342 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 EBF4Q9BQW3 602 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 SLC39A3Q9BRY0 314 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 GP6Q9HCN6 339 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 SLC52A3Q9NQ40 469 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 KLHL13Q9P2N7 655 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 LIPT1Q9Y234 373 aa17.65■□□□□ 0.42
PDZRN3-202ENST00000308537 DSCAMO60469 2012 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 IGHV3-15A0A0B4J1V0 119 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 GJE1A6NN92 205 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 RFXANKO14593 260 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 UBDO15205 165 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 CYP7B1O75881 506 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 PLGP00747 810 aaPredicted RBP17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 CD53P19397 219 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 CTBP2P56545 445 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 TXNL4AP83876 142 aaKnown RBP17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 GPAT3Q53EU6 434 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 ANKRD34AQ69YU3 496 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 C3orf33Q6P1S2 294 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 MSANTD1Q6ZTZ1 278 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 KRTAP1-3Q8IUG1 177 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 FUNDC1Q8IVP5 155 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 TUSC5Q8IXB3 177 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 GABRG1Q8N1C3 465 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 TRIML2Q8N7C3 387 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 AURKBQ96GD4 344 aaPredicted RBP17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 ALPK1Q96QP1 1244 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 ZBTB18Q99592 522 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 PSD2Q9BQI7 771 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 BCO1Q9HAY6 547 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 CHST2Q9Y4C5 530 aa17.64■□□□□ 0.41
PDZRN3-202ENST00000308537 NF1P21359 2839 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 AP3D1O14617 1153 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 KLF4O43474 513 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 DIAPH2O60879 1101 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 RAF1P04049 648 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms