RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TMEFF1Q8IYR6 380 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 DPCDQ9BVM2 203 aaPredicted RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 CCDC86Q9H6F5 360 aaKnown RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 PLEK2Q9NYT0 353 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 ZNF226Q9NYT6 803 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 GALR3O60755 368 aaPredicted RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 HTR2AP28223 471 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 HSF5Q4G112 596 aaPredicted RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 TMEM31Q5JXX7 168 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 OPN5Q6U736 354 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 MRPL21Q7Z2W9 205 aaKnown RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 PLPP6Q8IY26 295 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 FAIMQ9NVQ4 179 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 CACNG2Q9Y698 323 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 CDC14CA4D256 554 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 CDK2P24941 298 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 RPS5P46782 204 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 ZNF91Q05481 1191 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 ZP2Q05996 745 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 PPA1Q15181 289 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 SF3B4Q15427 424 aaKnown RBP eCLIP14.88□□□□□ -0.034e-6■□□□□ 9.9
USP42-201ENST00000306177 CLEC1AQ8NC01 280 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 NPRL2Q8WTW4 380 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 HLA-CQ95604 372 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 POLHQ9Y253 713 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 ZNF264O43296 627 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 ATG12O94817 140 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 APLNRP35414 380 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 EIF2S3P41091 472 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 MBTPS1Q14703 1052 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 MYEF2Q9P2K5 600 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 CARD8Q9Y2G2 431 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 NSG1A0A0A6YYJ2 146 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 GASTP01350 101 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 POU3F2P20265 443 aaPredicted RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 PFN3P60673 137 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 MAT1AQ00266 395 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 EEF1A2Q05639 463 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 SF3A2Q15428 464 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 CYP4V2Q6ZWL3 525 aaPredicted RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 PELI3Q8N2H9 469 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 C16orf58Q96GQ5 468 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 HHLA2Q9UM44 414 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 NUBP2Q9Y5Y2 271 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 EVPLQ92817 2033 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 ARG2P78540 354 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 MRPL58Q14197 206 aaKnown RBP14.88□□□□□ -0.03
USP42-201ENST00000306177 ZNF740Q8NDX6 193 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 MSANTD3Q96H12 275 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 PHB2Q99623 299 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 OR10A5Q9H207 317 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 OR10A2Q9H208 303 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 P2RY12Q9H244 342 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 EGLN3Q9H6Z9 239 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 MED17Q9NVC6 651 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 SLC39A1Q9NY26 324 aa14.88□□□□□ -0.03
USP42-201ENST00000306177 SC5DO75845 299 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 RAB3DO95716 219 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 SERPINA5P05154 406 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 GDF1P27539 372 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 LEXMQ3ZCV2 418 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 OR5D14Q8NGL3 314 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 WDR83Q9BRX9 315 aaKnown RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 ACAD8Q9UKU7 415 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 V9GY05 133 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 KCNK5O95279 499 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 CD79AP11912 226 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 ARSBP15848 533 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 TMEM201Q5SNT2 666 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 METTL11BQ5VVY1 283 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 NCCRP1Q6ZVX7 275 aaPredicted RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 CCDC71LQ8N9Z2 235 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 SYNPRQ8TBG9 265 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 CNOT9Q92600 299 aaKnown RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 TM4SF18Q96CE8 201 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 RRNAD1Q96FB5 475 aaKnown RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 MAP3K3Q99759 626 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 REV1Q9UBZ9 1251 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 CLDN24A6NM45 220 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 DAPP51397 102 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 AKR1C2P52895 323 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 EEF1A1P68104 462 aaKnown RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 NKPD1Q17RQ9 610 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 HENMT1Q5T8I9 393 aaKnown RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 OR4F15Q8NGB8 312 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 ADAMTS14Q8WXS8 1223 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 MRPL38Q96DV4 380 aaKnown RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 THAP7Q9BT49 309 aaPredicted RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 ZNF576Q9H609 170 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 CXorf36Q9H7Y0 433 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 ZFP57Q9NU63 452 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 C7orf72A4D263 438 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 GOSR2O14653 212 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 HOXC11O43248 304 aaPredicted RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 SCRG1O75711 98 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 IGLV3-25P01717 112 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 IGHG1P01857 330 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 KIAA1211LQ6NV74 962 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms