RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PEX11GQ96HA9 241 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 METTL17Q9H7H0 456 aaPredicted RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CCM2LQ9NUG4 571 aaPredicted RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 PLEK2Q9NYT0 353 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 POMT1Q9Y6A1 747 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CD63P08962 238 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TAS2R19P59542 299 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 OR13C9Q8NGT0 318 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 GPR148Q8TDV2 347 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 SECTM1Q8WVN6 248 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 PCNPQ8WW12 178 aaKnown RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF382Q96SR6 550 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TMEM181Q9P2C4 612 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 OR1A2Q9Y585 309 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ABCA7Q8IZY2 2146 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TYRP14679 529 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 RBMS1P29558 406 aaKnown RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TIA1P31483 386 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CASP3P42574 277 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 RPS15P62841 145 aaKnown RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 OR5P2Q8WZ92 322 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TM7SF3Q9NS93 570 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 OR8U8P0C7N1 319 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 OR13C7P0DN81 318 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ABOP16442 354 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 GABREP78334 506 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ARG2P78540 354 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 GRM2Q14416 872 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 GNG12Q9UBI6 72 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 AHSGP02765 367 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 GSTP1P09211 210 aaKnown RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 KCNE1P15382 129 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 NOL4LQ96MY1 436 aaPredicted RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 SAP130Q9H0E3 1048 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 PISDQ9UG56 409 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 M1APQ8TC57 530 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF599Q96NL3 588 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 KCTD3Q9Y597 815 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF17P17021 662 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CD1CP29017 333 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CNR2P34972 360 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 FAM182AQ5T1J6 154 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 MEX3DQ86XN8 651 aaKnown RBP12.63□□□□□ -0.39
TRIM56-201ENST00000306085 FEVQ99581 238 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 P2RX3P56373 397 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TBPL1P62380 186 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 BAMBIQ13145 260 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ELOCQ15369 112 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF678Q5SXM1 525 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 FOXN4Q96NZ1 517 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ERVMER34-1Q9H9K5 563 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 DOCK11Q5JSL3 2073 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 K7ERQ8 282 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 APEHP13798 732 aaKnown RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SLC11A1P49279 550 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 KLF8O95600 359 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 INHBEP58166 350 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 GNB1P62873 340 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 FAM74A1Q5RGS3 127 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 BMFQ96LC9 184 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 MAGIXQ9H6Y5 334 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TNFRSF1BP20333 461 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 OR8B8Q15620 311 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 APOBEC3HQ6NTF7 200 aaKnown RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TRAPPC2P0DI81 140 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TRAPPC2BP0DI82 140 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF728P0DKX0 622 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 CT45A10P0DMU9 189 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 STC1P52823 247 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 PRPS1P60891 318 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 RPS15AP62244 130 aaKnown RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 UBE2G1P62253 170 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 USP50Q70EL3 339 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 LRRTM1Q86UE6 522 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SEZ6LQ9BYH1 1024 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 GKN1Q9NS71 199 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SLC7A7Q9UM01 511 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 UGDHO60701 494 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SIX6O95475 246 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 AADACP22760 399 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 DIO3P55073 304 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 LPCAT3Q6P1A2 487 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 BRI3BPQ8WY22 251 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 FCRL3Q96P31 734 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ENKD1Q9H0I2 346 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 FAM159BA6NKW6 160 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 JRKO75564 520 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 HSD17B7P56937 341 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ERVFC1P60507 584 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 PXT1Q8NFP0 134 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SGPP1Q9BX95 441 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms