RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 DUSP21Q9H596 190 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 A4GALTQ9NPC4 353 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CAMK2AQ9UQM7 478 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 GMDSO60547 372 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 FBLP22087 321 aaKnown RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 HIST1H1TP22492 207 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 HOXD9P28356 352 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ALDH3B1P43353 468 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ZSCAN4Q8NAM6 433 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 FNDC9Q8TBE3 224 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 STK35Q8TDR2 534 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 DTD2Q96FN9 168 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SPIN2AQ99865 258 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SPIN2BQ9BPZ2 258 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF416Q9BWM5 594 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 LRFN1Q9P244 771 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 KCNS2Q9ULS6 477 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SLC35A3Q9Y2D2 325 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 A6NIZ1 184 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 H3BUI4 141 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CRTAPO75718 401 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 MPIG6BO95866 241 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 LALBAP00709 142 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CLEC2LP0C7M8 214 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 HTR1FP30939 366 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 RAP1BP61224 184 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 RAP1AP62834 184 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 TEKQ02763 1124 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 TCEAL8Q8IYN2 117 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 NANOGP1Q8N7R0 232 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 OR4M1Q8NGD0 313 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 DDIT4LQ96D03 193 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SLC38A1Q9H2H9 487 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CWH43Q9H720 699 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 NTN4Q9HB63 628 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 WASH6PQ9NQA3 447 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CRYBG1Q9Y4K1 1723 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 CPED1A4D0V7 1026 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 TAPBPO15533 448 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 SGCEO43556 437 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF35P13682 527 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 SHC1P29353 583 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 POU3F4P49335 361 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 GLO1Q04760 184 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 TMEM244Q5VVB8 128 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 SIAH3Q8IW03 269 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 NLGN4XQ8N0W4 816 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 OR52N1Q8NH53 320 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 UBE2FQ969M7 185 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 SAMD11Q96NU1 681 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 AKIP1Q9NQ31 210 aa12.02□□□□□ -0.48
COL3A1-201ENST00000304636 SMLR1H3BR10 107 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 MTHFD2P13995 350 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 TM9SF4Q92544 642 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 SLC9B1P1A6NJY1 282 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 ZNF254O75437 659 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 TRAPPC6AO75865 159 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 TAS2R20P59543 309 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 TDGQ13569 410 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 LIPIQ6XZB0 460 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 MBOAT2Q6ZWT7 520 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 LMF2Q9BU23 707 aaKnown RBP12.02□□□□□ -0.49
COL3A1-201ENST00000304636 NPIPA5A0A0B4J1W7 369 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 NPIPA7E9PJI5 369 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 RAD1O60671 282 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 NPIPA8P0DM63 369 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 ITGB7P26010 798 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 ETV1P50549 477 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 PLP2Q04941 152 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 BPIFB2Q8N4F0 458 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 OR10K1Q8NGX5 313 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 CLEC2DQ9UHP7 191 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 ATXN7L1Q9ULK2 861 aaPredicted RBP12.02□□□□□ -0.49
COL3A1-201ENST00000304636 HHLA2Q9UM44 414 aa12.02□□□□□ -0.49
COL3A1-201ENST00000304636 TJP1Q07157 1748 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 FAM230AA0A1W2PPH8 454 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 A6NL46 340 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 RAB5CP51148 216 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 CAV2P51636 162 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 HTR3DQ70Z44 454 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 ZFAND1Q8TCF1 268 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 DUSP19Q8WTR2 217 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 GHSRQ92847 366 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 C16orf58Q96GQ5 468 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 SLC17A9Q9BYT1 436 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 PHLPP1O60346 1717 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 C1SP09871 688 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 OR2T7P0C7T2 308 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 S100A11P31949 105 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 SIRPAP78324 504 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 HTR4Q13639 388 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms