RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 GUSBP08236 651 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GGT5P36269 586 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR12D2P58182 307 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MEP1AQ16819 746 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PRAMEF14Q5SWL7 426 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 B3GLCTQ6Y288 498 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 REC114Q7Z4M0 266 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TAC4Q86UU9 113 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FAM217AQ8IXS0 508 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 YIPF7Q8N8F6 280 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CDRT4Q8N9R6 151 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NETO1Q8TDF5 533 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CLEC4DQ8WXI8 215 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ABHD14BQ96IU4 210 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ATOH8Q96SQ7 321 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GOLGA2P5Q9HBQ8 144 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CSNK1G1Q9HCP0 422 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DUS2Q9NX74 493 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 EP300Q09472 2414 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 A0A1W2PQ09 198 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 A0A1W2PQL4 384 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR6C74A6NCV1 312 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DDTLA6NHG4 134 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 E5RGE8 158 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ARHGAP33O14559 1287 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PRKCGP05129 697 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SMIM17P0DL12 118 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NELFEP18615 380 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 KITLGP21583 273 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CPT2P23786 658 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CRABP1P29762 137 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 VIPR1P32241 457 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CHRNA4P43681 627 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 RAB13P51153 203 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GPR17Q13304 367 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ATAT1Q5SQI0 421 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TMIGD1Q6UXZ0 262 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SH2D5Q6ZV89 423 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR8S1Q8NH09 359 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF461Q8TAF7 563 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 YIPF6Q96EC8 236 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SPNS1Q9H2V7 528 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF391Q9UJN7 358 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 LAMP5Q9UJQ1 280 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 A0A0B4J2A0 478 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CASTOR2A6NHX0 329 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PPP1R11O60927 126 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DUSP11O75319 330 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NDUFB2O95178 105 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PFKMP08237 780 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TGM1P22735 817 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NAAAQ02083 359 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TOMM34Q15785 309 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DECR1Q16698 335 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PLCXD3Q63HM9 321 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CMTM1Q8IZ96 169 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 BOLLQ8N9W6 283 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NHLRC2Q8NBF2 726 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 WDR77Q9BQA1 342 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SHARPINQ9H0F6 387 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SHPKQ9UHJ6 478 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CPED1A4D0V7 1026 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 A8MX80 341 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FAM227AF5H4B4 570 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NFKBIEO00221 500 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ATP1B1P05026 303 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CNR1P21554 472 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SRP9P49458 86 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SLC10A6Q3KNW5 377 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SPANXN4Q5MJ08 99 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 YOD1Q5VVQ6 348 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 WSCD1Q658N2 575 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CNIH2Q6PI25 160 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NPNTQ6UXI9 565 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF574Q6ZN55 896 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 KCTD9Q7L273 389 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GRAMD2AQ8IUY3 354 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZMIZ2Q8NF64 920 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR6M1Q8NGM8 313 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR5AK2Q8NH90 309 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF689Q96CS4 500 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ARSGQ96EG1 525 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PECRQ9BY49 303 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ATG5Q9H1Y0 275 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CARS2Q9HA77 564 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 LMAN1LQ9HAT1 526 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CENPMQ9NSP4 180 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SH2B3Q9UQQ2 575 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PLSCR5A0PG75 271 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 FAM149AA5PLN7 773 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 TRIM77I1YAP6 450 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 SIGLEC6O43699 453 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 TM4SF1P30408 202 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 MSX2P35548 267 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 AMZ1Q400G9 498 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 PPM1JQ5JR12 505 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ZC3H14Q6PJT7 736 aaKnown RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 OPN5Q6U736 354 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms