RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TRBV11-1A0A0K0K1C0 115 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 SCO2O43819 266 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 DBTP11182 482 aaKnown RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ACP1P24666 158 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ZFP36L1Q07352 338 aaKnown RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 KLHL22Q53GT1 634 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 FAM199XQ6PEV8 388 aaPredicted RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 GALNT15Q8N3T1 639 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 CLDN22Q8N7P3 220 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ANKK1Q8NFD2 765 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF582Q96NG8 517 aaPredicted RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 STRADBQ9C0K7 418 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 IRF2BPLQ9H1B7 796 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF223Q9UK11 482 aaPredicted RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 VPS13AQ96RL7 3174 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 RALGAPA1Q6GYQ0 2036 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 TRAV27A0A087WT01 109 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 A0A1W2PPW3 197 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 MYL12BO14950 172 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ATE1O95260 518 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 CD36P16671 472 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 MYL12AP19105 171 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ENDOUP21128 410 aaKnown RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 LSM3P62310 102 aaKnown RBP13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 LSAMPQ13449 338 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 TMEM44Q2T9K0 475 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC35F1Q5T1Q4 408 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 TMPRSS11FQ6ZWK6 438 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 ZSCAN1Q8NBB4 408 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 POGLUT1Q8NBL1 392 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 OR5L2Q8NGL0 311 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 SGTBQ96EQ0 304 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 UBQLN3Q9H347 655 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 HHATLQ9HCP6 504 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 FKBP14Q9NWM8 211 aa13.31□□□□□ -0.28
SHCBP1-201ENST00000303383 IRGMA1A4Y4 181 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 PRODHO43272 600 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 KLF4O43474 513 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 LYPD3O95274 346 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 BCL10O95999 233 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 PIPP12273 146 aaPredicted RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 CDH11P55287 796 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 C1DQ13901 141 aaKnown RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 DESI1Q6ICB0 168 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 MARCH3Q86UD3 253 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 LSRQ86X29 649 aaPredicted RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 OR4Q3Q8NH05 313 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 MEPEQ9NQ76 525 aaPredicted RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 RABL2AQ9UBK7 228 aaPredicted RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 A0A0C4DFX4 3053 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 PPM1BO75688 479 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 ADH7P40394 386 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC6A8P48029 635 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 CLK1P49759 484 aaKnown RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 PSPHP78330 225 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 MC2RQ01718 297 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 UBE2UQ5VVX9 321 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 CBLN3Q6UW01 205 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 B4GALNT2Q8NHY0 566 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 BRIX1Q8TDN6 353 aaKnown RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 TAS2R16Q9NYV7 291 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 ENPP5Q9UJA9 477 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 PTRH2Q9Y3E5 179 aaKnown RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 HEATR5AQ86XA9 2040 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 WWP2O00308 870 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 TO15178 435 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 ADORA3P0DMS8 318 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 PNMTP11086 282 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF28P17035 718 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 CTBP2P56545 445 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 ANKRD13BQ86YJ7 626 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 CACTIN-AS1Q8N1I8 211 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 SPSB2Q99619 263 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 FBXO8Q9NRD0 319 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 NPFFR2Q9Y5X5 522 aa13.3□□□□□ -0.28
SHCBP1-201ENST00000303383 VSTM2BA6NLU5 285 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 M0R3G1 203 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 PTHP01270 115 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 RPL4P36578 427 aaKnown RBP13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC16A1P53985 500 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 NCF4Q15080 339 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 SF3A2Q15428 464 aaKnown RBP13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 LCN10Q6JVE6 187 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 APOOLQ6UXV4 268 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 C17orf47Q8NEP4 570 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 RNFT2Q96EX2 444 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 AKIRIN1Q9H9L7 192 aaPredicted RBP13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 SURF4O15260 269 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 TSPAN2O60636 221 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 RAB36O95755 333 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 PAICSP22234 425 aaKnown RBP13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC6A6P31641 620 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 MTNR1AP48039 350 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 RPS7P62081 194 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms