RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SBSNQ6UWP8 590 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 GCNT2Q8N0V5 402 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SLC15A4Q8N697 577 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF516Q92618 1163 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 BPIFA2Q96DR5 249 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF845Q96IR2 970 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SIX2Q9NPC8 291 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 DMAC2Q9NW81 257 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 HHLA2Q9UM44 414 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 PTGDR2Q9Y5Y4 395 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ENPP4Q9Y6X5 453 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 LRRC37A3O60309 1634 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 HBE1P02100 147 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 MT-ND4P03905 459 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 PROS1P07225 676 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 PFKMP08237 780 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 DEFA4P12838 97 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 EMP2P54851 167 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 DMWDQ09019 674 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 MBTPS1Q14703 1052 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 NADSYN1Q6IA69 706 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 B3GLCTQ6Y288 498 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 CTU1Q7Z7A3 348 aaKnown RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 METTL4Q8N3J2 472 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SERINC2Q96SA4 455 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SMOQ99835 787 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ZFYVE21Q9BQ24 234 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SUCNR1Q9BXA5 334 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 TPSD1Q9BZJ3 242 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 TAS2R16Q9NYV7 291 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 CSNK1G3Q9Y6M4 447 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SLC22A23A1A5C7 686 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PRAMEF27A3QJZ7 478 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 RAB19A4D1S5 217 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 METTL15P1P0C7V9 234 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 DLX5P56178 289 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PDE7AQ13946 482 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 UNC50Q53HI1 259 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PRAMEF9Q5VWM5 478 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF546Q86UE3 836 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 LACC1Q8IV20 430 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF486Q96H40 463 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 LMF2Q9BU23 707 aaKnown RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ARV1Q9H2C2 271 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 INIPQ9NRY2 104 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 SSUH2Q9Y2M2 353 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 IGLV3-22A0A075B6J6 115 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ATP6V1G2-DDX39BF2Z307 99 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 H3BMQ9 156 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 MITFO75030 526 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 EDN3P14138 238 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 SSTR4P31391 388 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 HNRNPFP52597 415 aaKnown RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TAS2R46P59540 309 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 HBG1P69891 147 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 HBG2P69892 147 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PLA2G7Q13093 441 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 HES1Q14469 280 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 IER5LQ5T953 404 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 COX15Q7KZN9 410 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 OSTM1Q86WC4 334 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 MINDY1Q8N5J2 469 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 CDRT4Q8N9R6 151 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 OR4M1Q8NGD0 313 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 RTP3Q9BQQ7 232 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 METTL9Q9H1A3 318 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 RIMS3Q9UJD0 308 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PTRH2Q9Y3E5 179 aaKnown RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PCDHA9Q9Y5H5 950 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 V9GY05 133 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TUSC2O75896 110 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ACPPP15309 386 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TBPP20226 339 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TNFRSF1BP20333 461 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 NFATC3Q12968 1075 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 MICAQ29983 383 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 SLC35G1Q2M3R5 365 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ACSM3Q53FZ2 586 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 FAM213BQ8TBF2 198 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 CLEC4DQ8WXI8 215 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ELP4Q96EB1 424 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 REEP6Q96HR9 211 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ANKRD19PQ9H560 264 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 SFXN1Q9H9B4 322 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 J3QR89 54 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 M0R3H8 397 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 CLDN1O95832 211 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TXNDC12O95881 172 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 OLFM2O95897 454 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 RABIFP47224 123 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 GALEQ14376 348 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 UPP1Q16831 310 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 OVCH1Q7RTY7 1134 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 C14orf80Q86SX3 495 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ZNRF4Q8WWF5 429 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 BOCQ9BWV1 1114 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 PINK1Q9BXM7 581 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms