RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 FBXO8Q9NRD0 319 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 MUTYHQ9UIF7 546 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 GPR179Q6PRD1 2367 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 A0A0B4J2E0 115 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 A0A1B0GX12 115 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 CD8B2A6NJW9 211 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 SULT1C4O75897 302 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 NCR1O76036 304 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 CD8BP10966 210 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 TBXA2RP21731 343 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 DRD5P21918 477 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 CD40LGP29965 261 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
SMG8-201ENST00000300917 HSD11B2P80365 405 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 FOXK2Q01167 660 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 TCTE1Q5JU00 501 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 EXOSC6Q5RKV6 272 aaKnown RBP13.41□□□□□ -0.26
SMG8-201ENST00000300917 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 TMPRSS9Q7Z410 1059 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 FAM210AQ96ND0 272 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 ZNF559Q9BR84 538 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 CHRDQ9H2X0 955 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 CCDC86Q9H6F5 360 aaKnown RBP13.41□□□□□ -0.26
SMG8-201ENST00000300917 TXNL4BQ9NX01 149 aaKnown RBP13.41□□□□□ -0.26
SMG8-201ENST00000300917 CTSFQ9UBX1 484 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 CELSR3Q9NYQ7 3312 aa13.41□□□□□ -0.26
SMG8-201ENST00000300917 KDM4EB2RXH2 506 aaPredicted RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 AK1P00568 194 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 SDC2P34741 201 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 UGT2B10P36537 528 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 CD300CQ08708 224 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 FAM69BQ5VUD6 431 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 APOOLQ6UXV4 268 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 PARP16Q8N5Y8 322 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 NR4A3Q92570 626 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 ERMAPQ96PL5 475 aaPredicted RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 NDC1Q9BTX1 674 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 LMF2Q9BU23 707 aaKnown RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 KLHL1Q9NR64 748 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 STUB1Q9UNE7 303 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 SIGLEC7Q9Y286 467 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 DUX1O43812 170 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 ATP12AP54707 1039 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 COPZ1P61923 177 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 MLLT11Q13015 90 aaPredicted RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 ZNF615Q8N8J6 731 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 SLC37A3Q8NCC5 494 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 RFKQ969G6 155 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 FGF21Q9NSA1 209 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 SNX4O95219 450 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 NUDT14O95848 222 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 NR0B1P51843 470 aaKnown RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 HSD17B7P56937 341 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 ZMAT1Q5H9K5 638 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 LAX1Q8IWV1 398 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 FAM98AQ8NCA5 519 aaKnown RBP13.4□□□□□ -0.26
SMG8-201ENST00000300917 OR4C6Q8NH72 309 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 PTP4A1Q93096 173 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 CCDC74AQ96AQ1 378 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 ZNF524Q96C55 264 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 LANCL2Q9NS86 450 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 NDUFB11Q9NX14 153 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 SEC14L4Q9UDX3 406 aa13.4□□□□□ -0.26
SMG8-201ENST00000300917 SERINC4A6NH21 518 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 PRR23D1E9PI22 279 aaPredicted RBP13.39□□□□□ -0.27
SMG8-201ENST00000300917 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 K7ESF4 209 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 BHLHE40O14503 412 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 CHP2O43745 196 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 HMGN1P05114 100 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 PRR23D2P0DMB1 279 aaPredicted RBP13.39□□□□□ -0.27
SMG8-201ENST00000300917 ZNF12P17014 697 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 FABP5Q01469 135 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 C3orf38Q5JPI3 329 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 POC5Q8NA72 575 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 ZMYND19Q96E35 227 aaPredicted RBP13.39□□□□□ -0.27
SMG8-201ENST00000300917 RTN4RQ9BZR6 473 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 FAIMQ9NVQ4 179 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 ZNF346Q9UL40 294 aaKnown RBP13.39□□□□□ -0.27
SMG8-201ENST00000300917 NAA10P41227 235 aaPredicted RBP13.39□□□□□ -0.27
SMG8-201ENST00000300917 PRKCDQ05655 676 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 OTPQ5XKR4 325 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 OR5M10Q6IEU7 315 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 UTS2BQ765I0 119 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 PLXDC1Q8IUK5 500 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 OR8H2Q8N162 312 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 PIGKQ92643 395 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 MALT1Q9UDY8 824 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 CFL2Q9Y281 166 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 IER3IP1Q9Y5U9 82 aa13.39□□□□□ -0.27
SMG8-201ENST00000300917 C2orf72A6NCS6 295 aa13.38□□□□□ -0.27
SMG8-201ENST00000300917 FAM86C2PA6NEL3 165 aa13.38□□□□□ -0.27
SMG8-201ENST00000300917 GDF9O60383 454 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms