RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZGLP1P0C6A0 271 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 HNRNPCL4P0DMR1 293 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 GDI2P50395 445 aaKnown RBP13.61□□□□□ -0.23
COL6A2-201ENST00000300527 AKR1C2P52895 323 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 AKR1C1Q04828 323 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 RPE65Q16518 533 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FAM74A3Q4VXF1 159 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 RASGRP3Q8IV61 690 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 CNRIP1Q96F85 164 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-201ENST00000300527 TEAD3Q99594 435 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FN3KQ9H479 309 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 SYNPO2LQ9H987 977 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 STON1Q9Y6Q2 735 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 TRBV2A0A0J9YWF9 115 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 GOSR2O14653 212 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 RPP14O95059 124 aaKnown RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 MAKP20794 623 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 SLC9A5Q14940 896 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 BEX5Q5H9J7 111 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 PARS2Q7L3T8 475 aaKnown RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 PDZD9Q8IXQ8 264 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 FAM98AQ8NCA5 519 aaKnown RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 IGSF21Q96ID5 467 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 POT1Q9NUX5 634 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 KIF25Q9UIL4 384 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 ACSL5Q9ULC5 683 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 ZMIZ1Q9ULJ6 1067 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 A0A1B0GVT2 93 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 RIIAD1A6NNX1 92 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 MCRIP1C9JLW8 97 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 CERS1P27544 350 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 S100A11P31949 105 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 IRF5Q13568 498 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 LRRC37A5PQ49AS3 106 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 TMEM88Q6PEY1 159 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 UBE3DQ7Z6J8 389 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 ING5Q8WYH8 240 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 CDS1Q92903 461 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF707Q96C28 371 aaPredicted RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF578Q96N58 590 aaPredicted RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 IL36AQ9UHA7 158 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 XIRP2A4UGR9 3374 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 SUSD5O60279 629 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 KRT33AO76009 404 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 GPNMBQ14956 572 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 LY6G5CQ5SRR4 150 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 TMEM69Q5SWH9 247 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 RGS7BPQ6MZT1 257 aaPredicted RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF547Q8IVP9 402 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 OR4C6Q8NH72 309 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 PTP4A1Q93096 173 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 PAWRQ96IZ0 340 aaKnown RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 DMRTA2Q96SC8 542 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 SHARPINQ9H0F6 387 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 HPF1Q9NWY4 346 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 SIDT1Q9NXL6 827 aaKnown RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 MRTO4Q9UKD2 239 aaKnown RBP13.6□□□□□ -0.23
COL6A2-201ENST00000300527 CAMK2AQ9UQM7 478 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 SCN3AQ9NY46 2000 aa13.6□□□□□ -0.23
COL6A2-201ENST00000300527 IDSB3KWA1 339 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 MAT2AP31153 395 aaKnown RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 PRR5P85299 388 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 ETFDHQ16134 617 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 TMEM215Q68D42 235 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 MBOAT2Q6ZWT7 520 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 TPRA1Q86W33 373 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SDR9C7Q8NEX9 313 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 OR8S1Q8NH09 359 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 OR4K13Q8NH42 304 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SMIM4Q8WVI0 70 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 WDR34Q96EX3 536 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 TIMP4Q99727 224 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SARGQ9BW04 601 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SLC23A2Q9UGH3 650 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 WDR45Q9Y484 360 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 A0A1W2PR48 441 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 UBE2QL1A1L167 161 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 KRBOX1C9JBD0 128 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 EGFP01133 1207 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 LRG1P02750 347 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 LRRN1Q6UXK5 716 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 OR6K6Q8NGW6 343 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 FCAMRQ8WWV6 532 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 LRRC46Q96FV0 321 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SLC46A2Q9BY10 475 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 RHBGQ9H310 441 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 NOX4Q9NPH5 578 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 ACSS1Q9NUB1 689 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 HCFC1R1Q9NWW0 138 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 MED11Q9P086 117 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 TRPM7Q96QT4 1865 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 CCL16O15467 120 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 NFATC1O95644 943 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms