RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ARPINQ7Z6K5 226 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 IFNEQ86WN2 208 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 LACC1Q8IV20 430 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TEX19Q8NA77 164 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TMEM178AQ8NBL3 297 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 C11orf65Q8NCR3 313 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 HIPK4Q8NE63 616 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 OR2T12Q8NG77 320 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 OR4D11Q8NGI4 311 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 OR10Q1Q8NGQ4 319 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 BBS10Q8TAM1 723 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 POC1BQ8TC44 478 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 DUSP19Q8WTR2 217 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TMCO6Q96DC7 493 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SH3YL1Q96HL8 342 aaPredicted RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 ZNF597Q96LX8 424 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SLX1AQ9BQ83 275 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ECSITQ9BQ95 431 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 DOHHQ9BU89 302 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SPATA9Q9BWV2 254 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 CADM1Q9BY67 442 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 PCDHAC1Q9H158 963 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 C1orf21Q9H246 121 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 DSN1Q9H410 356 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 MTHFD2LQ9H903 347 aaPredicted RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 ZFP64Q9NPA5 681 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SPAG4Q9NPE6 437 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ASF1BQ9NVP2 202 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 THUMPD1Q9NXG2 353 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 MRTO4Q9UKD2 239 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 ICAM5Q9UMF0 924 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ZNF443Q9Y2A4 671 aaPredicted RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 CARD8Q9Y2G2 431 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 C15orf41Q9Y2V0 281 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 DTNAQ9Y4J8 743 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ELOVL7A1L3X0 281 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 CDHR4A6H8M9 788 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 KDM4EB2RXH2 506 aaPredicted RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 KLRC4-KLRK1H3BQV0 150 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 M0QX08 132 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ETV2O00321 342 aaPredicted RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 CXCR6O00574 342 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 SCDO00767 359 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ARPC2O15144 300 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 EFNA2O43921 213 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 GMFGO60234 142 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 HS6ST1O60243 411 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 CDC40O60508 579 aaKnown RBP eCLIP5.34□□□□□ -1.55
SSX3-201ENST00000298396 SEMA7AO75326 666 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 SNX4O95219 450 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 RASAL1O95294 804 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 NTN1O95631 604 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 IGHG3P01860 377 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 DBIP07108 87 aaKnown RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 LINGO3P0C6S8 592 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 UBTFL6P0CB48 400 aaPredicted RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 GKN3PP0CG01 181 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ZNF24P17028 368 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 GGT1P19440 569 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 TCN1P20061 433 aaPredicted RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 TNFRSF1BP20333 461 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 IL11P20809 199 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ATP6V1B2P21281 511 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 FUT4P22083 530 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 PSMA4P25789 261 aaKnown RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 HTR2AP28223 471 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 HTR1EP28566 365 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ANXA11P50995 505 aaKnown RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 KCNJ10P78508 379 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 HOXC5Q00444 222 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 HSF1Q00613 529 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 MS4A2Q01362 244 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 VEZF1Q14119 521 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 NRF1Q16656 503 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 DUSP7Q16829 419 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 PLPPR5Q32ZL2 321 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 PGM2L1Q6PCE3 622 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 DHRS4L2Q6PKH6 230 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 C16orf89Q6UX73 402 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ASRGL1Q7L266 308 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 PLCZ1Q86YW0 608 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 RBM45Q8IUH3 476 aaKnown RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 GRAMD2AQ8IUY3 354 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 METTL25Q8N6Q8 603 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 FAM86B1Q8N7N1 296 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 ZNF614Q8N883 585 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 SMYD1Q8NB12 490 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 FAM83FQ8NEG4 500 aaPredicted RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 OR5M1Q8NGP8 315 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 OR1J4Q8NGS1 313 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 OR52P1PQ8NH57 321 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 PHOSPHO1Q8TCT1 267 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 GPR119Q8TDV5 335 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 WDR60Q8WVS4 1066 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 FAR1Q8WVX9 515 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 NR4A3Q92570 626 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 PMM1Q92871 262 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 C1GALT1C1Q96EU7 318 aa5.34□□□□□ -1.55
SSX3-201ENST00000298396 JSRP1Q96MG2 331 aaPredicted RBP5.34□□□□□ -1.55
SSX3-201ENST00000298396 SH3GL1Q99961 368 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms