RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 LINC00303Q3SY05 128 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 ZNF311Q5JNZ3 666 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 PRAMEF8Q5VWM4 474 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 PRAMEF7Q5VXH5 474 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 FCRLBQ6BAA4 426 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 TMEM220Q6QAJ8 160 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 GHSRQ92847 366 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 ZCCHC2Q9C0B9 1178 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 RHBGQ9H310 441 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 PCDHGA5Q9Y5G8 931 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 SIX6O95475 246 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 POP4O95707 220 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 ZNF85Q03923 595 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 TMEM115Q12893 351 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 IL10RAQ13651 578 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 KCNA10Q16322 511 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 PRAMEF13Q5VWM6 474 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 FIBINQ8TAL6 211 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 BRIX1Q8TDN6 353 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 GLYATL1Q969I3 302 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 DNTTIP1Q9H147 329 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 ST6GALNAC2Q9UJ37 374 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 SLC6A5Q9Y345 797 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 CXorf51AA0A1B0GTR3 108 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 CHURC1-FNTBB4DL54 471 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 NEDD8-MDP1E9PL57 170 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 GATCO43716 136 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 REM1O75628 298 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 NT5EP21589 574 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 MAT2AP31153 395 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 OR12D2P58182 307 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 POLR2LP62875 67 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 GPNMBQ14956 572 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 VRK2Q86Y07 508 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 OR5J2Q8NH18 312 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 SETD7Q8WTS6 366 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 TMEM255BQ8WV15 326 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 ORAI1Q96D31 301 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 NKX6-2Q9C056 277 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 MRPL17Q9NRX2 175 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 NDRG3Q9UGV2 375 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 NTNG1Q9Y2I2 539 aa12.52□□□□□ -0.4
RPUSD4-201ENST00000298317 ANKRD20A5PA0PJZ0 165 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 CDHR4A6H8M9 788 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 J3QLW9 94 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 SIGLEC5O15389 551 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 KRT33AO76009 404 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 PCDH8O95206 1070 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 FABP1P07148 127 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 ZNF19P17023 458 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 MST1P26927 711 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 MAPK3P27361 379 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 OR1D2P34982 312 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 CD96P40200 585 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 ANXA11P50995 505 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 SIGLEC14Q08ET2 396 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 LASP1Q14847 261 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 FAM199XQ6PEV8 388 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 LCTLQ6UWM7 567 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 TMEM64Q6YI46 380 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 OVCH1Q7RTY7 1134 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 GDF7Q7Z4P5 450 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 NUDT13Q86X67 352 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 OR6K3Q8NGY3 331 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 ZNF671Q8TAW3 534 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 OR1F2PQ96R84 312 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 SLC38A1Q9H2H9 487 aa12.52□□□□□ -0.41
RPUSD4-201ENST00000298317 SLC22A31A6NKX4 558 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 BHLHE40O14503 412 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 ARL6IP5O75915 188 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 NDUFB6O95139 128 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 SERPINA3P01011 423 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 UCHL1P09936 223 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 MPGP29372 298 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 GATMP50440 423 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 DLX5P56178 289 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 H2BFSP57053 126 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 FXYD6P3P58550 94 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 DEFA5Q01523 94 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 MELKQ14680 651 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 TSC22D1Q15714 1073 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 GDPD4Q6W3E5 623 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 HMGB4Q8WW32 186 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 LMLNQ96KR4 655 aa12.51□□□□□ -0.41
RPUSD4-201ENST00000298317 OR52D1Q9H346 318 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms