RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 MIXL1Q9H2W2 232 aa22.07■■□□□ 1.12
TRIM54-201ENST00000296098 MCCC2Q9HCC0 563 aa22.07■■□□□ 1.12
TRIM54-201ENST00000296098 KNL1Q8NG31 2342 aa22.07■■□□□ 1.12
TRIM54-201ENST00000296098 SMIM30A4D0T7 59 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 FITM1A5D6W6 292 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 TTC36A6NLP5 189 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 H0YIG0 161 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 GABRPO00591 440 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 CASKO14936 926 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 SERTAD2Q14140 314 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 MARCH9Q86YJ5 346 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 ZNF615Q8N8J6 731 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 PTP4A1Q93096 173 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 TMCO6Q96DC7 493 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 CHRNA10Q9GZZ6 450 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 SPRTNQ9H040 489 aaPredicted RBP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 ISG20L2Q9H9L3 353 aaKnown RBP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 INPP5EQ9NRR6 644 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 LRIT1Q9P2V4 623 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 EPHA6Q9UF33 1036 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 A0A1W2PQL4 384 aaPredicted RBP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 DAPL1A0PJW8 107 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 LMO7DNF2Z398 122 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 GAAP10253 952 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 CD1CP29017 333 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 SLC16A1P53985 500 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 HNRNPKP61978 463 aaKnown RBP eCLIP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 RPL6Q02878 288 aaKnown RBP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 C14orf28Q4W4Y0 310 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 ZMAT1Q5H9K5 638 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 DESI1Q6ICB0 168 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 ARHGAP11AQ6P4F7 1023 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 LINC00114Q6XXX2 140 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 RTL4Q6ZR62 310 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 GDPD3Q7L5L3 318 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 DNAJA4Q8WW22 397 aaPredicted RBP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 TNFRSF13CQ96RJ3 184 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 TBX5Q99593 518 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 HDHD5Q9BXW7 423 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 SRRQ9GZT4 340 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 OR51V1Q9H2C8 321 aa22.06■■□□□ 1.12
TRIM54-201ENST00000296098 MRPS17Q9Y2R5 130 aaKnown RBP22.06■■□□□ 1.12
TRIM54-201ENST00000296098 SERINC4A6NH21 518 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 EFCAB7A8K855 629 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 CSTAP01040 98 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 HK1P19367 917 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 NOS3P29474 1203 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 GALNSP34059 522 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 CRMP1Q14194 572 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 GRM7Q14831 915 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 NDUFAF6Q330K2 333 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 FAM181AQ8N9Y4 354 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 OR10H4Q8NGA5 316 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 SETD6Q8TBK2 473 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 ZDHHC12Q96GR4 267 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 TEAD3Q99594 435 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 PRODH2Q9UF12 536 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 POLHQ9Y253 713 aa22.05■■□□□ 1.12
TRIM54-201ENST00000296098 SDC3O75056 442 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 IFNGP01579 166 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 CLPSP04118 112 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 PEPDP12955 493 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 SLC2A5P22732 501 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 AZGP1P25311 298 aaKnown RBP22.04■■□□□ 1.12
TRIM54-201ENST00000296098 GPR143P51810 404 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 NXPH1P58417 271 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 FHL1Q13642 323 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 GALEQ14376 348 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.04■■□□□ 1.12
TRIM54-201ENST00000296098 FAM131AQ6UXB0 335 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 NEIL3Q8TAT5 605 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 RAB33BQ9H082 229 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 MKKSQ9NPJ1 570 aaPredicted RBP22.04■■□□□ 1.12
TRIM54-201ENST00000296098 MUTYHQ9UIF7 546 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 TBC1D24Q9ULP9 559 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 SPTBP11277 2137 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 RHPN2P1A8MT19 583 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 GNB5O14775 395 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 REM1O75628 298 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 GALP22466 123 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 GPR50Q13585 617 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 ZNF362Q5T0B9 420 aaPredicted RBP22.04■■□□□ 1.12
TRIM54-201ENST00000296098 NKAIN2Q5VXU1 208 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 CCBE1Q6UXH8 406 aaPredicted RBP22.04■■□□□ 1.12
TRIM54-201ENST00000296098 CAMKK1Q8N5S9 505 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 OR4C3Q8NH37 302 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 HPS1Q92902 700 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 HSPA12BQ96MM6 686 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 TRIM36Q9NQ86 728 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 BABAM2Q9NXR7 383 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 MAU2Q9Y6X3 613 aa22.04■■□□□ 1.12
TRIM54-201ENST00000296098 RNF13O43567 381 aa22.03■■□□□ 1.12
TRIM54-201ENST00000296098 ATXN8OSP0DMR3 200 aa22.03■■□□□ 1.12
TRIM54-201ENST00000296098 IL9P15248 144 aa22.03■■□□□ 1.12
TRIM54-201ENST00000296098 EPHA4P54764 986 aa22.03■■□□□ 1.12
TRIM54-201ENST00000296098 DBPQ10586 325 aaPredicted RBP22.03■■□□□ 1.12
TRIM54-201ENST00000296098 GLYR1Q49A26 553 aaPredicted RBP22.03■■□□□ 1.12
TRIM54-201ENST00000296098 OGFOD3Q6PK18 319 aa22.03■■□□□ 1.12
TRIM54-201ENST00000296098 CYB561A3Q8NBI2 242 aa22.03■■□□□ 1.12
TRIM54-201ENST00000296098 DIRAS2Q96HU8 199 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms