RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PRKRAO75569 313 aaKnown RBP12.56□□□□□ -0.4
HPS3-201ENST00000296051 ZNF20P17024 532 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 KCNJ10P78508 379 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 ALG1LQ6GMV1 187 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 SLC7A13Q8TCU3 470 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 SLC7A7Q9UM01 511 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 A0A0J9YY10 115 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 EMC8O43402 210 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 PPP1R3DO95685 299 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 TACSTD2P09758 323 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 TAS2R43P59537 309 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 RAB40BQ12829 278 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 C6orf132Q5T0Z8 1188 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 LRIF1Q5T3J3 769 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 CPNE2Q96FN4 548 aaPredicted RBP12.55□□□□□ -0.4
HPS3-201ENST00000296051 PIGUQ9H490 435 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 GRHPRQ9UBQ7 328 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ANTXRLA6NF34 631 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 HMGA1P17096 107 aaKnown RBP12.55□□□□□ -0.4
HPS3-201ENST00000296051 SLC6A6P31641 620 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ESCO2Q56NI9 601 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 THAP10Q9P2Z0 257 aaPredicted RBP12.55□□□□□ -0.4
HPS3-201ENST00000296051 ZNF639Q9UID6 485 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 HS3ST2Q9Y278 367 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 IMPA1P29218 277 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 CBX5P45973 191 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ERVK-25P63136 954 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 TFF2Q03403 129 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ACVR1Q04771 509 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 DBPQ10586 325 aaPredicted RBP12.55□□□□□ -0.4
HPS3-201ENST00000296051 ARFRP1Q13795 201 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 KIR2DS3Q14952 304 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 LINC00299Q6ZSB3 139 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ZNF611Q8N823 705 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 CCDC54Q8NEL0 328 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 OR13H1Q8NG92 308 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 OR52I1Q8NGK6 324 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 CCDC107Q8WV48 283 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 GIMAP1Q8WWP7 306 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 C16orf58Q96GQ5 468 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SFXN2Q96NB2 322 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 LMF1Q96S06 567 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
HPS3-201ENST00000296051 COPS3Q9UNS2 423 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 RREB1Q92766 1687 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SLC22A31A6NKX4 558 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SFTPDP35247 375 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ETV5P41161 510 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SLC1A3P43003 542 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ETV1P50549 477 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 TAP2Q03519 686 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 CDC20Q12834 499 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SMCO1Q147U7 214 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 PLK5Q496M5 336 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 ZNF550Q7Z398 422 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 PTOV1Q86YD1 416 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 GPALPP1Q8IXQ4 340 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 OR9A2Q8NGT5 310 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 C4orf36Q96KX1 117 aa12.55□□□□□ -0.4
HPS3-201ENST00000296051 SOCS6O14544 535 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ARHGEF15O94989 841 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 PRKCAP17252 672 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 SAXO2Q658L1 398 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 C3P1Q6ZMU1 363 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 CFAP77Q6ZQR2 320 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 C10orf111Q8N326 155 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 FGF14Q92915 247 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ELSPBP1Q96BH3 223 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 NSG1A0A0A6YYJ2 146 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 C2CD4DB7Z1M9 353 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 CXCL10P02778 98 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 TP53P04637 393 aaPredicted RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 ENDOUP21128 410 aaKnown RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 CERS1P27544 350 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 KIAA1024LP59773 190 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 S100A10P60903 97 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 YPEL5P62699 121 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ERV3-1Q14264 604 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 DCAF12Q5T6F0 453 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 PRSS45Q7RTY3 260 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 KANSL1Q7Z3B3 1105 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 SYT9Q86SS6 491 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ZNF101Q8IZC7 436 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 BEST3Q8N1M1 668 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 OR6T1Q8NGN1 323 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 LINC01599Q8WXQ3 324 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ATG5Q9H1Y0 275 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 BRF2Q9HAW0 419 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 SPTBP11277 2137 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 A0A1W2PPL8 197 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 EEF1E1-BLOC1S5C9J1V9 151 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 CSF3P09919 207 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ACP2P11117 423 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 TCN2P20062 427 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms