RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TRNP1Q6NT89 227 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 SLC16A9Q7RTY1 509 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 SYNPRQ8TBG9 265 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 WDR83Q9BRX9 315 aaKnown RBP16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ARNT2Q9HBZ2 717 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 NUMA1Q14980 2115 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 SERPINA2P20848 420 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 IRS1P35568 1242 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 KEAP1Q14145 624 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 NDNFQ8TB73 568 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 PHB2Q99623 299 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 GFRA2O00451 464 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 SLC43A1O75387 559 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 MEX3BQ6ZN04 569 aaKnown RBP16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ACOT11Q8WXI4 607 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-201ENST00000293441 RABL2AQ9UBK7 228 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-201ENST00000293441 CNOT11Q9UKZ1 510 aaKnown RBP16.16■□□□□ 0.18
SHANK1-201ENST00000293441 EMCNQ9ULC0 261 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 RABL2BQ9UNT1 228 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 CENPBD1B2RD01 187 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 GALR3O60755 368 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF44P15621 663 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 RRADP55042 308 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 SLC22A6Q4U2R8 563 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 TECPR1Q7Z6L1 1165 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF845Q96IR2 970 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-201ENST00000293441 TCN2P20062 427 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 CLDN17P56750 224 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 FAM57BQ71RH2 274 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 MAFIPQ8WZ33 124 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 ITFG2Q969R8 447 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 TMEM45AQ9NWC5 275 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 OR14J1Q9UGF5 321 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 GPR160Q9UJ42 338 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF264O43296 627 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 PTHP01270 115 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 IGHEP01854 428 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 PCBD1P61457 104 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 NLKQ9UBE8 527 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 KCNK5O95279 499 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 IL7P13232 177 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 SEC61A1P61619 476 aaKnown RBP16.15■□□□□ 0.18
SHANK1-201ENST00000293441 KCNJ10P78508 379 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 NIPAL3Q6P499 406 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 METTL4Q8N3J2 472 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 OR13H1Q8NG92 308 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 TMEM184BQ9Y519 407 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-201ENST00000293441 CAMLGP49069 296 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 LTB4RQ15722 352 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 HAGHLQ6PII5 290 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-201ENST00000293441 ADAMTSL4Q6UY14 1074 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 OR1S1Q8NH92 325 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 C22orf15Q8WYQ4 148 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 HAO2Q9NYQ3 351 aa16.15■□□□□ 0.18
SHANK1-201ENST00000293441 RRP8O43159 456 aaKnown RBP16.14■□□□□ 0.18
SHANK1-201ENST00000293441 CACNG3O60359 315 aa16.14■□□□□ 0.18
SHANK1-201ENST00000293441 IMPA1P29218 277 aa16.14■□□□□ 0.18
SHANK1-201ENST00000293441 MAGEA6P43360 314 aa16.14■□□□□ 0.18
SHANK1-201ENST00000293441 INHBCP55103 352 aa16.14■□□□□ 0.18
SHANK1-201ENST00000293441 VN1R3Q9BXE9 311 aa16.14■□□□□ 0.18
SHANK1-201ENST00000293441 PCDHGA8Q9Y5G5 932 aa16.14■□□□□ 0.18
SHANK1-201ENST00000293441 MAGED1Q9Y5V3 778 aaPredicted RBP16.14■□□□□ 0.18
SHANK1-201ENST00000293441 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 FANCGO15287 622 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 HTR5AP47898 357 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SEMA6CQ9H3T2 930 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 MED16Q9Y2X0 877 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 OR8U9P0C7N5 309 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 DHRS4L1P0CG22 281 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 ARL6IP1Q15041 203 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 GPR149Q86SP6 731 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SGPP2Q8IWX5 399 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 FER1L6-AS2Q96M78 137 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 TM7SF3Q9NS93 570 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 THAP10Q9P2Z0 257 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF223Q9UK11 482 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 GLSO94925 669 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SIRPAP78324 504 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 MGAT3Q09327 533 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 ACSM3Q53FZ2 586 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 PLAG1Q6DJT9 500 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 BORAQ6PGQ7 559 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF534Q76KX8 674 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SLC16A14Q7RTX9 510 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 COMTD1Q86VU5 262 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 PDLIM5Q96HC4 596 aaKnown RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 HHIPL1Q96JK4 782 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 DPCDQ9BVM2 203 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 CALHM2Q9HA72 323 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 NOSIPQ9Y314 301 aaKnown RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 TAZQ16635 292 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM244Q5VVB8 128 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF322Q6U7Q0 402 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SULT4A1Q9BR01 284 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SLC6A20Q9NP91 592 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 PRKRAO75569 313 aaKnown RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 CBX7O95931 251 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms