RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF888P0CJ79 500 aaPredicted RBP11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 CLUP10909 449 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 DLSTP36957 453 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 PAPD4Q6PIY7 484 aaKnown RBP11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 TMEM205Q6UW68 189 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 PHOSPHO1Q8TCT1 267 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 MAP6Q96JE9 813 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 ARL5BQ96KC2 179 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 MRTO4Q9UKD2 239 aaKnown RBP11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 TMPRSS11EQ9UL52 423 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 METTL15A6NJ78 407 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 PRRT4C9JH25 899 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 PRAMEF2O60811 474 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 TXNDC12O95881 172 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 TIMP1P01033 207 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 P2RY2P41231 377 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 GPR157Q5UAW9 335 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 GLT8D1Q68CQ7 371 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 FAM83HQ6ZRV2 1179 aaPredicted RBP11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 NUP54Q7Z3B4 507 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 OR5M3Q8NGP4 307 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 SPRYD4Q8WW59 207 aaPredicted RBP11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 CYP8B1Q9UNU6 501 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 KCNIP3Q9Y2W7 256 aa11.74□□□□□ -0.53
SLC6A1-201ENST00000287766 UNC119BA6NIH7 251 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 H3BUI4 141 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 CTSLP07711 333 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 RIPPLY1Q0D2K3 151 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 SELENBP1Q13228 472 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ITPRIPL2Q3MIP1 535 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ZNF585AQ6P3V2 769 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 CCDC54Q8NEL0 328 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 VN1R2Q8NFZ6 395 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 OR10K1Q8NGX5 313 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 DYNC2LI1Q8TCX1 351 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 RAB7BQ96AH8 199 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 TM4SF18Q96CE8 201 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ALG14Q96F25 216 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 NEDD4LQ96PU5 975 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC6A17Q9H1V8 727 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 IL23AQ9NPF7 189 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 RCE1Q9Y256 329 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 FOXE1O00358 373 aaPredicted RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ZNF208O43345 1280 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 SNAPINO95295 136 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 HIST1H1TP22492 207 aaPredicted RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ELAVL4P26378 380 aaKnown RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 RPS19P39019 145 aaKnown RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 FRKP42685 505 aaPredicted RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 GSG1LQ6UXU4 331 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 DCUN1D4Q92564 292 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ZBP1Q9H171 429 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 GLIPR2Q9H4G4 154 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 LIPT1Q9Y234 373 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 MYOGP15173 224 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 S100PP25815 95 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 RPS25P62851 125 aaKnown RBP11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 PEA15Q15121 130 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 Q6ZNB5 142 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 KANSL1Q7Z3B3 1105 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 KLHDC8BQ8IXV7 354 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ZFP82Q8N141 532 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 ST8SIA4Q92187 359 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 SAMD11Q96NU1 681 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 TCEAL7Q9BRU2 100 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 GPATCH2Q9NW75 528 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 PCM1Q15154 2024 aa11.73□□□□□ -0.53
SLC6A1-201ENST00000287766 HSPA12AO43301 675 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 WISP3O95389 354 aaPredicted RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 AHSA1O95433 338 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 EXOSC7Q15024 291 aaKnown RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 VASNQ6EMK4 673 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 LRFN4Q6PJG9 635 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 GPR135Q8IZ08 494 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 OR52E2Q8NGJ4 325 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 GIMAP1Q8WWP7 306 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 LYSMD1Q96S90 227 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 OR8D2Q9GZM6 311 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 NIPAL2Q9H841 368 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 NOX3Q9HBY0 568 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 CLDND1Q9NY35 253 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 ATG4BQ9Y4P1 393 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 CACNA1IQ9P0X4 2223 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 ALPK2Q86TB3 2170 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC22A31A6NKX4 558 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 FADS1O60427 444 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 HNRNPA1P09651 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 CFL1P23528 166 aaKnown RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 NDUFS1P28331 727 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 PRDX1Q06830 199 aaKnown RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 ELOAQ14241 798 aaKnown RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 IRF4Q15306 451 aa11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 PAN3Q58A45 887 aaKnown RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 ZMYND19Q96E35 227 aaPredicted RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 TCEAL2Q9H3H9 227 aaPredicted RBP11.72□□□□□ -0.53
SLC6A1-201ENST00000287766 ZNF701Q9NV72 531 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms