RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 DPYSL5Q9BPU6 564 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 VN1R1Q9GZP7 353 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 ZNF768Q9H5H4 540 aaKnown RBP21.26■□□□□ 0.99
RAB40B-201ENST00000269347 MCCC2Q9HCC0 563 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 FBXO8Q9NRD0 319 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 FBLP22087 321 aaKnown RBP21.25■□□□□ 0.99
RAB40B-201ENST00000269347 MST1P26927 711 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 ARRB1P49407 418 aaPredicted RBP21.25■□□□□ 0.99
RAB40B-201ENST00000269347 C3orf38Q5JPI3 329 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 FAAH2Q6GMR7 532 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 USP43Q70EL4 1123 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 ZNF554Q86TJ5 538 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 SMAP2Q8WU79 429 aaPredicted RBP21.25■□□□□ 0.99
RAB40B-201ENST00000269347 DACH2Q96NX9 599 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 OR1F2PQ96R84 312 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 NDC1Q9BTX1 674 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 G6PC3Q9BUM1 346 aa21.25■□□□□ 0.99
RAB40B-201ENST00000269347 IGHV3-20A0A0C4DH32 117 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 MYL12BO14950 172 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 GDF9O60383 454 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 ENDOUP21128 410 aaKnown RBP21.24■□□□□ 0.99
RAB40B-201ENST00000269347 CRYZQ08257 329 aaKnown RBP21.24■□□□□ 0.99
RAB40B-201ENST00000269347 HLA-BQ31612 363 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 MCFD2Q8NI22 146 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 KISS1RQ969F8 398 aaPredicted RBP21.24■□□□□ 0.99
RAB40B-201ENST00000269347 TMEM203Q969S6 136 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 ZNF578Q96N58 590 aaPredicted RBP21.24■□□□□ 0.99
RAB40B-201ENST00000269347 DCLRE1CQ96SD1 692 aaKnown RBP21.24■□□□□ 0.99
RAB40B-201ENST00000269347 TIMP4Q99727 224 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 MMACHCQ9Y4U1 282 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 A0A1B0GTQ1 180 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 PSMD7P51665 324 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 CCL7P80098 99 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 FOXK2Q01167 660 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 ARHGAP40Q5TG30 622 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 CXXC5Q7LFL8 322 aaKnown RBP21.24■□□□□ 0.99
RAB40B-201ENST00000269347 GPR135Q8IZ08 494 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 LNX2Q8N448 690 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 NACC2Q96BF6 587 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 MVB12AQ96EY5 273 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 GAL3ST4Q96RP7 486 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 RACGAP1Q9H0H5 632 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 C14orf105Q9NVL8 296 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 NDUFB11Q9NX14 153 aa21.24■□□□□ 0.99
RAB40B-201ENST00000269347 IMPA2O14732 288 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 PPP1R3DO95685 299 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 HNRNPCP07910 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 MLLT11Q13015 90 aaPredicted RBP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 NSDHLQ15738 373 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 KLHL22Q53GT1 634 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 NXNL2Q5VZ03 156 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 CYB561A3Q8NBI2 242 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 PIGKQ92643 395 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 C3orf49Q96BT1 292 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 BARHL1Q9BZE3 327 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 TRIM2Q9C040 744 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 PRODH2Q9UF12 536 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 MKL2Q9ULH7 1088 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 CLCA3PQ9Y6N3 262 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 IGKV1D-42A0A075B6H8 117 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 A0A1B0GX78 115 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 J3QRE1 110 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 INAQ16352 499 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 ZNF791Q3KP31 576 aaPredicted RBP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 ZNF404Q494X3 552 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 PLK5Q496M5 336 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 BMP8AQ7Z5Y6 402 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 FAM71CQ8NEG0 241 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 OR7G1Q8NGA0 311 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 ADOQ96SZ5 270 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 IFT27Q9BW83 186 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 NXF2Q9GZY0 626 aaKnown RBP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 RERGLQ9H628 205 aa21.23■□□□□ 0.99
RAB40B-201ENST00000269347 EXOSC4Q9NPD3 245 aaKnown RBP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 SF3B6Q9Y3B4 125 aaKnown RBP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 SPIN1Q9Y657 262 aaPredicted RBP21.23■□□□□ 0.99
RAB40B-201ENST00000269347 PLD2O14939 933 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 GMFGO60234 142 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 HTR1FP30939 366 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 RPS19P39019 145 aaKnown RBP21.22■□□□□ 0.99
RAB40B-201ENST00000269347 SLC1A3P43003 542 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 PPICP45877 212 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 SLC9A3P48764 834 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 WNT4P56705 351 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 RPS25P62851 125 aaKnown RBP21.22■□□□□ 0.99
RAB40B-201ENST00000269347 NIPAL3Q6P499 406 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 C16orf47Q6ZP98 133 aaPredicted RBP21.22■□□□□ 0.99
RAB40B-201ENST00000269347 CARFQ8N187 725 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 EXOGQ9Y2C4 368 aaKnown RBP21.22■□□□□ 0.99
RAB40B-201ENST00000269347 ALPK2Q86TB3 2170 aa21.22■□□□□ 0.99
RAB40B-201ENST00000269347 ICOSLGO75144 302 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 IL33O95760 270 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 SKP2Q13309 424 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 EBPQ15125 230 aaKnown RBP21.21■□□□□ 0.99
RAB40B-201ENST00000269347 TMEM71Q6P5X7 295 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 OR51G2Q8NGK0 314 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 MED17Q9NVC6 651 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 SERTAD3Q9UJW9 196 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 FREM2Q5SZK8 3169 aa21.21■□□□□ 0.99
RAB40B-201ENST00000269347 CCDC182A6NF36 153 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms