RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MED20Q9H944 212 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 ZMIZ1Q9ULJ6 1067 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 GPR34Q9UPC5 381 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 INSL5Q9Y5Q6 135 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 MPTX1A8MV57 137 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 OR1F1O43749 312 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 PIP5K1CO60331 668 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ERAL1O75616 437 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 MPIP34949 423 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 FAUP35544 74 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 OR12D2P58182 307 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ACTA2P62736 377 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ACTG2P63267 376 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ILF3Q12906 894 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 RAB33AQ14088 237 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 UBE3DQ7Z6J8 389 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 RANBP3LQ86VV4 465 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 CDH26Q8IXH8 852 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 OR5M9Q8NGP3 310 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 LGALS14Q8TCE9 139 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 CNOT9Q92600 299 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 DTD2Q96FN9 168 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 MTHFD2LQ9H903 347 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 SIDT1Q9NXL6 827 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 IL36AQ9UHA7 158 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ST6GALNAC2Q9UJ37 374 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 MAFFQ9ULX9 164 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC7A7Q9UM01 511 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC35A3Q9Y2D2 325 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ANKRD20A5PA0PJZ0 165 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ZC3H12DA2A288 527 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 PCP4L1A6NKN8 68 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ANXA2P2A6NMY6 339 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 NEDD8-MDP1E9PL57 170 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 H3BUI4 141 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 LGALS8O00214 317 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ADRB1P08588 477 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 RAB40ALP0C0E4 278 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ZGLP1P0C6A0 271 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ERGP11308 486 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 SELPP16109 830 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 GJA1P17302 382 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ATP5A1P25705 553 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 TEAD1P28347 426 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 GABRR2P28476 465 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF85Q03923 595 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 GPNMBQ14956 572 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 UBXN2BQ14CS0 331 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 TMCO2Q7Z6W1 182 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 NUP43Q8NFH3 380 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 OR52I2Q8NH67 350 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 RAB40AQ8WXH6 277 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 AUTS2Q8WXX7 1259 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 PIGKQ92643 395 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 SMIM19Q96E16 107 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 S100A16Q96FQ6 103 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 C16orf58Q96GQ5 468 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 OR51V1Q9H2C8 321 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 TAS2R10Q9NYW0 307 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 CYB5R1Q9UHQ9 305 aa11.49□□□□□ -0.57
CHMP2B-201ENST00000263780 FEZF1A0PJY2 475 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 LEFTY2O00292 366 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 VEGFDO43915 354 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 NDUFB6O95139 128 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 GDI2P50395 445 aaKnown RBP11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 FOXK2Q01167 660 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ETFDHQ16134 617 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 OR5M10Q6IEU7 315 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ESPNLQ6ZVH7 1005 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF765Q7L2R6 523 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 CCDC116Q8IYX3 515 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 SYS1Q8N2H4 156 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 HDDC3Q8N4P3 179 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 OR4C6Q8NH72 309 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ACTRT3Q9BYD9 372 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ADGRL4Q9HBW9 690 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 CA10Q9NS85 328 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 HPF1Q9NWY4 346 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 MRPL15Q9P015 296 aaKnown RBP11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 PLAGL1Q9UM63 463 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 COPS3Q9UNS2 423 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF443Q9Y2A4 671 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 KCNE3Q9Y6H6 103 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 A0A0B4J203 849 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 TRAPPC13A5PLN9 417 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 H7BY64 318 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ACOT7O00154 380 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ARPC5O15511 151 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 NTN1O95631 604 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms