RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 OIT3Q8WWZ8 545 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 TMEM234Q8WY98 164 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 ST8SIA1Q92185 356 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 SRXN1Q9BYN0 137 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 TIGARQ9NQ88 270 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 ACER3Q9NUN7 267 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 GALNT8Q9NY28 637 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 SLC25A37Q9NYZ2 338 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 TACC2O95359 2948 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 ARHGAP21Q5T5U3 1957 aa16.51■□□□□ 0.23
COPE-201ENST00000262812 TMEM247A6NEH6 219 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 TUBAL3A6NHL2 446 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 AP3D1O14617 1153 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 DNAJA2O60884 412 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 CCNA2P20248 432 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 SLC7A1P30825 629 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 IDH2P48735 452 aaKnown RBP16.5■□□□□ 0.23
COPE-201ENST00000262812 CRISP3P54108 245 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 GUCY1A3Q02108 690 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 PLAURQ03405 335 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 SELENBP1Q13228 472 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 PLEKHM3Q6ZWE6 761 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 TMEM200AQ86VY9 491 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 VRK2Q86Y07 508 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 MSRB3Q8IXL7 192 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 ZNF610Q8N9Z0 462 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 FAM71CQ8NEG0 241 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 MAL2Q969L2 176 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 TMEM19Q96HH6 336 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 REXO5Q96IC2 774 aaKnown RBP16.5■□□□□ 0.23
COPE-201ENST00000262812 TMEM120AQ9BXJ8 343 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 RAD21L1Q9H4I0 556 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 SERINC1Q9NRX5 453 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 FGFR1OP2Q9NVK5 253 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 RLIMQ9NVW2 624 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 CALML5Q9NZT1 146 aa16.5■□□□□ 0.23
COPE-201ENST00000262812 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.5■□□□□ 0.23
COPE-201ENST00000262812 PKDREJQ9NTG1 2253 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 A0A1W2PP18 115 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 MSTNO14793 375 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 ADAM11O75078 769 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 HOXB9P17482 250 aaPredicted RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 PEX19P40855 299 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 HCFC1P51610 2035 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 CTBP2P56545 445 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 IRX1P78414 480 aaPredicted RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 FAM27E3Q08E93 113 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 LRIF1Q5T3J3 769 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 MRPL2Q5T653 305 aaKnown RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 FAM214BQ7L5A3 538 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 LSRQ86X29 649 aaPredicted RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 CMIPQ8IY22 773 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 STON2Q8WXE9 905 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 PMM1Q92871 262 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 DNAJA3Q96EY1 480 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 OR5B2Q96R09 309 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 SIKE1Q9BRV8 207 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 EXOSC3Q9NQT5 275 aaKnown RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 CTPS2Q9NRF8 586 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 TMEM45AQ9NWC5 275 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 THUMPD1Q9NXG2 353 aaKnown RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 DNAJB12Q9NXW2 375 aaKnown RBP16.49■□□□□ 0.23
COPE-201ENST00000262812 VAPAQ9P0L0 249 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 PROCRQ9UNN8 238 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 ABCA12Q86UK0 2595 aa16.49■□□□□ 0.23
COPE-201ENST00000262812 IGHV3-15A0A0B4J1V0 119 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 A0A0G2JPF8 293 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 HNRNPCL2B2RXH8 293 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 HNRNPCL3B7ZW38 293 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 ETV2O00321 342 aaPredicted RBP16.48■□□□□ 0.23
COPE-201ENST00000262812 HNRNPCL1O60812 293 aaKnown RBP16.48■□□□□ 0.23
COPE-201ENST00000262812 CGAP01215 116 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 HNRNPCL4P0DMR1 293 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 TROVE2P10155 538 aaKnown RBP eCLIP16.48■□□□□ 0.23
COPE-201ENST00000262812 TFPIP10646 304 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 NID1P14543 1247 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 RPS4Y1P22090 263 aaKnown RBP16.48■□□□□ 0.23
COPE-201ENST00000262812 KCNJ5P48544 419 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 EXOC3L2Q2M3D2 409 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 GTF2IRD2BQ6EKJ0 949 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 ZNF474Q6S9Z5 364 aaPredicted RBP16.48■□□□□ 0.23
COPE-201ENST00000262812 GTF2IRD2Q86UP8 949 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 FAM222BQ8WU58 562 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 GMPPAQ96IJ6 420 aaPredicted RBP16.48■□□□□ 0.23
COPE-201ENST00000262812 ZNF385DQ9H6B1 395 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 COQ10BQ9H8M1 238 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 CACYBPQ9HB71 228 aaKnown RBP16.48■□□□□ 0.23
COPE-201ENST00000262812 ZNF232Q9UNY5 417 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 EMC9Q9Y3B6 208 aa16.48■□□□□ 0.23
COPE-201ENST00000262812 C5orf58C9J3I9 102 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 GKN3PP0CG01 181 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 ENPP1P22413 925 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 APOBEC1P41238 236 aaKnown RBP16.47■□□□□ 0.23
COPE-201ENST00000262812 ARFIP2P53365 341 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 GUSBP1Q15486 140 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 ZNF239Q16600 458 aaKnown RBP16.47■□□□□ 0.23
COPE-201ENST00000262812 LIN52Q52LA3 116 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 C3orf33Q6P1S2 294 aa16.47■□□□□ 0.23
COPE-201ENST00000262812 ZNF836Q6ZNA1 936 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms