RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 NEDD4LQ96PU5 975 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 FYTTD1Q96QD9 318 aaKnown RBP12.52□□□□□ -0.41
VMP1-201ENST00000262291 GAL3ST4Q96RP7 486 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
VMP1-201ENST00000262291 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 NARFLQ9H6Q4 476 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 LANCL2Q9NS86 450 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 STMN3Q9NZ72 180 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 FER1L5A0AVI2 2057 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 NUDT21O43809 227 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 CPNE3O75131 537 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 SAGP10523 405 aaPredicted RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 NAT2P11245 290 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 GLB1P16278 677 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 SSX1Q16384 188 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 TBRG1Q3YBR2 411 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 GXYLT1Q4G148 440 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 ZNF620Q6ZNG0 422 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 LINC00471Q8N535 108 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 PTPMT1Q8WUK0 201 aaPredicted RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 FCGR1BQ92637 280 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 RNFT2Q96EX2 444 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 ST6GAL2Q96JF0 529 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 KLHDC3Q9BQ90 382 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 LMF2Q9BU23 707 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 C12orf4Q9NQ89 552 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 RPL36Q9Y3U8 105 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 MRPS14O60783 128 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 PRAMEF2O60811 474 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 CLPSP04118 112 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 NGFRP08138 427 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 FPR3P25089 353 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 GCGRP47871 477 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 FXYD6P3P58550 94 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 ZNF404Q494X3 552 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 TMEM201Q5SNT2 666 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 THSD4Q6ZMP0 1018 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 PLXDC1Q8IUK5 500 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 FAM26EQ8N5C1 309 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 ZFP41Q8N8Y5 198 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 OR4F15Q8NGB8 312 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 TMEM163Q8TC26 289 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 NECAB3Q96P71 396 aaPredicted RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 HHATLQ9HCP6 504 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 Q9N2J8 555 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 DNAJB12Q9NXW2 375 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 CNOT2Q9NZN8 540 aaKnown RBP12.51□□□□□ -0.41
VMP1-201ENST00000262291 EPHA6Q9UF33 1036 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 CBLCQ9ULV8 474 aa12.51□□□□□ -0.41
VMP1-201ENST00000262291 IGHV3-20A0A0C4DH32 117 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 PATE3B3GLJ2 98 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 H3BMH7 237 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 SOCS6O14544 535 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 KLF4O43474 513 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 CFIP05156 583 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 HBQ1P09105 142 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 IGLV3-21P80748 117 aaPredicted RBP12.5□□□□□ -0.41
VMP1-201ENST00000262291 TEKQ02763 1124 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 ZNF544Q6NX49 715 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 GPR135Q8IZ08 494 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 GHDCQ8N2G8 530 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 ZNF615Q8N8J6 731 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 TMEM203Q969S6 136 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 CCDC120Q96HB5 630 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 OPALINQ96PE5 141 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 ADAMTS9Q9P2N4 1935 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 UNC119BA6NIH7 251 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 OIP5O43482 229 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 CSTF2P33240 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
VMP1-201ENST00000262291 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
VMP1-201ENST00000262291 OR3A3P47888 321 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 CCR4P51679 360 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 HSD17B7P56937 341 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 LPAL2Q16609 132 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 OCLNQ16625 522 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 ARHGAP40Q5TG30 622 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 LHFPL3Q86UP9 236 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 FANK1Q8TC84 345 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
VMP1-201ENST00000262291 FGF11Q92914 225 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 PMEPA1Q969W9 287 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 SLC38A2Q96QD8 506 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 NDC1Q9BTX1 674 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 NXF5Q9H1B4 397 aaKnown RBP12.5□□□□□ -0.41
VMP1-201ENST00000262291 OR52D1Q9H346 318 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 TMEM27Q9HBJ8 222 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 FGF21Q9NSA1 209 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 SIDT1Q9NXL6 827 aaKnown RBP12.5□□□□□ -0.41
VMP1-201ENST00000262291 CTSFQ9UBX1 484 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
VMP1-201ENST00000262291 ZNF223Q9UK11 482 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms