RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 APOOQ9BUR5 198 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 OR51E2Q9H255 320 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PUS1Q9Y606 427 aaKnown RBP eCLIP13.41□□□□□ -0.26
CUX2-201ENST00000261726 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 FANCGO15287 622 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SORBS2O94875 1100 aaKnown RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 CDONQ4KMG0 1287 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 TP53INP2Q8IXH6 220 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 RBMXL1Q96E39 390 aaKnown RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 TCHHQ07283 1943 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 NME4O00746 187 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ACPPP15309 386 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 IDUAP35475 653 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 CXADRP78310 365 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ADOQ96SZ5 270 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 PPA2Q9H2U2 334 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 CNOT11Q9UKZ1 510 aaKnown RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 HIDE1A8MVS5 230 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 H7C1Q1 480 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 FBXO24O75426 580 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 SEC14L2O76054 403 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 EIF4EP06730 217 aaKnown RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 OPRL1P41146 370 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 EIF4HQ15056 248 aaKnown RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 OR8J2Q8NGG1 315 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 HSD17B8Q92506 261 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 MYADMQ96S97 322 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 DMRT3Q9NQL9 472 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 SLC9B1P1A6NJY1 282 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 TSTD3H0UI37 97 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 LCMT2O60294 686 aaKnown RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 ZNF767PQ75MW2 155 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 B3GNT7Q8NFL0 401 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 RAB39BQ96DA2 213 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 TCEAL2Q9H3H9 227 aaPredicted RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 EGLN3Q9H6Z9 239 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 UPK1BO75841 260 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 NXPH3O95157 252 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 FECHP22830 423 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 PROZP22891 400 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ZNF169Q14929 603 aaPredicted RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 ZFAND2BQ8WV99 257 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 LIPHQ8WWY8 451 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 WDR6Q9NNW5 1121 aaKnown RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 POM121CA8CG34 1229 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 NCR1O76036 304 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 HMGCLP35914 325 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 MRPS34P82930 218 aaKnown RBP13.4□□□□□ -0.26
CUX2-201ENST00000261726 TGFBR3Q03167 851 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 AADACL3Q5VUY0 350 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 SLC43A2Q8N370 569 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 TMEM130Q8N3G9 435 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 L3HYPDHQ96EM0 354 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 SLC12A9Q9BXP2 914 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ZDHHC7Q9NXF8 308 aa13.4□□□□□ -0.26
CUX2-201ENST00000261726 ARSAP15289 507 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 MAGEB1P43366 347 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 CDK5R2Q13319 367 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 DUSP7Q16829 419 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 RBMXL3Q8N7X1 1067 aaKnown RBP13.39□□□□□ -0.27
CUX2-201ENST00000261726 OR6F1Q8NGZ6 308 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 ZFAND1Q8TCF1 268 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
CUX2-201ENST00000261726 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 RAB27BO00194 218 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 HOXD13P35453 343 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 P2RX1P51575 399 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 TAS2R30P59541 319 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 MEF2DQ14814 521 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 CCNJQ5T5M9 372 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 IL20RBQ6UXL0 311 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
CUX2-201ENST00000261726 SLC7A13Q8TCU3 470 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 ZNF75AQ96N20 296 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 NOX3Q9HBY0 568 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 GOLGA4Q13439 2230 aaKnown RBP13.39□□□□□ -0.27
CUX2-201ENST00000261726 OMGP23515 440 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 GIFP27352 417 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 ATP1B3P54709 279 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 NPWQ8N729 165 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 PRRC1Q96M27 445 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 V9GY05 133 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 RPS10-NUDT3A0A1W2PQS6 291 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 RPS10P46783 165 aaKnown RBP13.39□□□□□ -0.27
CUX2-201ENST00000261726 F2RL1P55085 397 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 FAM69AQ5T7M9 428 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 PNPLA1Q8N8W4 532 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 PDCD1LG2Q9BQ51 273 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 TRAPPC2LQ9UL33 140 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 NAP1L6A6NFF2 107 aa13.39□□□□□ -0.27
CUX2-201ENST00000261726 TIMM8AO60220 97 aaPredicted RBP13.39□□□□□ -0.27
CUX2-201ENST00000261726 GPR32O75388 356 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms