RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TOMM20Q15388 145 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 NDUFAF6Q330K2 333 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 RNFT1Q5M7Z0 435 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 ZNF550Q7Z398 422 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 PHF10Q8WUB8 498 aaKnown RBP18.8■□□□□ 0.6
RTCA-201ENST00000260563 UBQLN3Q9H347 655 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 NTN4Q9HB63 628 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 EXOSC3Q9NQT5 275 aaKnown RBP18.8■□□□□ 0.6
RTCA-201ENST00000260563 QPCTLQ9NXS2 382 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 STOML1Q9UBI4 398 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 DKKL1Q9UK85 242 aa18.8■□□□□ 0.6
RTCA-201ENST00000260563 B4DXG7 233 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ADAMDEC1O15204 470 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 EIF4E2O60573 245 aaKnown RBP18.79■□□□□ 0.6
RTCA-201ENST00000260563 PRSS23O95084 383 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 PRG2P13727 222 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 P2RX1P51575 399 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 CCR4P51679 360 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 SKP2Q13309 424 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 GANABQ14697 944 aaKnown RBP18.79■□□□□ 0.6
RTCA-201ENST00000260563 CBLN3Q6UW01 205 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ZNF605Q86T29 641 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ZNF440Q8IYI8 595 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 CPT1CQ8TCG5 803 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 FAR1Q8WVX9 515 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 NR4A3Q92570 626 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 PRRC1Q96M27 445 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 MCHR1Q99705 422 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 LAT2Q9GZY6 243 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 TSPAN10Q9H1Z9 355 aaPredicted RBP18.79■□□□□ 0.6
RTCA-201ENST00000260563 TESQ9UGI8 421 aaKnown RBP18.79■□□□□ 0.6
RTCA-201ENST00000260563 ACAD8Q9UKU7 415 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 A4GNTQ9UNA3 340 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 TESMINQ9Y4I5 508 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 KALRNO60229 2985 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 OIP5O43482 229 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 TRAPPC6AO75865 159 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 RRM2P31350 389 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 MLLT10P55197 1068 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 SUMO3P55854 103 aaPredicted RBP18.79■□□□□ 0.6
RTCA-201ENST00000260563 DSCR4P56555 118 aaPredicted RBP18.79■□□□□ 0.6
RTCA-201ENST00000260563 SPIBQ01892 262 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 TRIP10Q15642 601 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ENTPD8Q5MY95 495 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ICA1LQ8NDH6 482 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 TOR1AIP2Q8NFQ8 470 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 PRR14Q9BWN1 585 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ZDHHC11Q9H8X9 412 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 REEP1Q9H902 201 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 ASF1BQ9NVP2 202 aa18.79■□□□□ 0.6
RTCA-201ENST00000260563 SHANK1Q9Y566 2161 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 ANKUB1A6NFN9 424 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 FFAR1O14842 300 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 CASQ2O14958 399 aaPredicted RBP18.78■□□□□ 0.6
RTCA-201ENST00000260563 FMO6PO60774 539 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 ADAM11O75078 769 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 NUDT14O95848 222 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 SRD5A2P31213 254 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 ACAA2P42765 397 aaKnown RBP18.78■□□□□ 0.6
RTCA-201ENST00000260563 TAS2R41P59536 307 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 PIN1Q13526 163 aaPredicted RBP18.78■□□□□ 0.6
RTCA-201ENST00000260563 CBFBQ13951 182 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 SIAH3Q8IW03 269 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 C1GALT1C1Q96EU7 318 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 ZNF559Q9BR84 538 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 POLR2J2Q9GZM3 115 aaKnown RBP18.78■□□□□ 0.6
RTCA-201ENST00000260563 POLR2J3Q9H1A7 115 aaKnown RBP18.78■□□□□ 0.6
RTCA-201ENST00000260563 CTPS2Q9NRF8 586 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 VNN3Q9NY84 501 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 RHCGQ9UBD6 479 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 RALYQ9UKM9 306 aaKnown RBP18.78■□□□□ 0.6
RTCA-201ENST00000260563 ICAM5Q9UMF0 924 aa18.78■□□□□ 0.6
RTCA-201ENST00000260563 ZNF407Q9C0G0 2248 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 CPSF4LA6NMK7 179 aaKnown RBP18.77■□□□□ 0.6
RTCA-201ENST00000260563 FAM47E-STBD1D6RA91 191 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 NPIPA5E9PKD4 350 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 HPNP05981 417 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 DPP4P27487 766 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 HTR2AP28223 471 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 ZNF41P51814 821 aaPredicted RBP18.77■□□□□ 0.6
RTCA-201ENST00000260563 CDH12P55289 794 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 EPS8Q12929 822 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 ZNF324BQ6AW86 544 aaPredicted RBP18.77■□□□□ 0.6
RTCA-201ENST00000260563 PLEKHM3Q6ZWE6 761 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 TSPYL5Q86VY4 417 aaPredicted RBP18.77■□□□□ 0.6
RTCA-201ENST00000260563 ZNF843Q8N446 348 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 DEFB127Q9H1M4 99 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 NPIPA1Q9UND3 350 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 SAMHD1Q9Y3Z3 626 aaKnown RBP18.77■□□□□ 0.6
RTCA-201ENST00000260563 U3KQV3 271 aa18.77■□□□□ 0.6
RTCA-201ENST00000260563 SVILO95425 2214 aa18.77■□□□□ 0.59
RTCA-201ENST00000260563 PRRC2CQ9Y520 2896 aaKnown RBP18.77■□□□□ 0.59
RTCA-201ENST00000260563 B8ZZF3 427 aa18.76■□□□□ 0.59
RTCA-201ENST00000260563 CDC40O60508 579 aaKnown RBP eCLIP18.76■□□□□ 0.59
RTCA-201ENST00000260563 DNAJC13O75165 2243 aa18.76■□□□□ 0.59
RTCA-201ENST00000260563 E2F6O75461 281 aa18.76■□□□□ 0.59
RTCA-201ENST00000260563 C1QL1O75973 258 aa18.76■□□□□ 0.59
RTCA-201ENST00000260563 CELA3AP09093 270 aa18.76■□□□□ 0.59
RTCA-201ENST00000260563 MST1P26927 711 aa18.76■□□□□ 0.59
RTCA-201ENST00000260563 IFNA8P32881 189 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms