RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OSMP13725 252 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 TRIM23P36406 574 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 GRB2P62993 217 aaKnown RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 HSPB2Q16082 182 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 WDR53Q7Z5U6 358 aaPredicted RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 CA13Q8N1Q1 262 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 MCFD2Q8NI22 146 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 TXNDC15Q96J42 360 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 OLAHQ9NV23 265 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF236Q9UL36 1845 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 KCNE1BA0A087WTH5 132 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 CEACAM1P13688 526 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 SHISA6Q6ZSJ9 500 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 TP53INP2Q8IXH6 220 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 RAB2BQ8WUD1 216 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 SENP5Q96HI0 755 aaPredicted RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 INTS14Q96SY0 518 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 ARAFP10398 606 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 OVCH1Q7RTY7 1134 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 TMEM41AQ96HV5 264 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 VN1R3Q9BXE9 311 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 ITPAQ9BY32 194 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 COL4A5P29400 1685 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 FOXO6A8MYZ6 492 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 PSMB5P28074 263 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 MAGEA3P43357 314 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 EIF2B1Q14232 305 aaKnown RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 LCN8Q6JVE9 175 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 ACBD7Q8N6N7 88 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 MS4A6EQ96DS6 147 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 A0A087WUU8 490 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 DPPA5A6NC42 116 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 LRIT2A6NDA9 550 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC33A1O00400 549 aaPredicted RBP12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 SOCS2O14508 198 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 SYT7O43581 403 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 CHRM4P08173 479 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 NPPBP16860 134 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 MAP2K4P45985 399 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 HSD17B12Q53GQ0 312 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 KRTCAP3Q53RY4 240 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 PRR22Q8IZ63 422 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.413e-8■■□□□ 12
PRPF38A-201ENST00000257181 ISL2Q96A47 359 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 NARS2Q96I59 477 aaKnown RBP12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 EBF4Q9BQW3 602 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 CLEC4EQ9ULY5 219 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 C2orf72A6NCS6 295 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 G3V2L1 256 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 RGS11O94810 467 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 RBM39Q14498 530 aaKnown RBP12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 TMEM92Q6UXU6 159 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 PDSS2Q86YH6 399 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 MSLNLQ96KJ4 702 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 DAPK2Q9UIK4 370 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 RNF175Q8N4F7 328 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 STEAP2Q8NFT2 490 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 OBP2BQ9NPH6 170 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 BRD7Q9NPI1 651 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 OR51B4Q9Y5P0 310 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 HNF1AP20823 631 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 RAD52P43351 418 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 MAT1AQ00266 395 aaKnown RBP12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 CHRFAM7AQ494W8 412 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 GUSBP11Q6P575 273 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 CCDC71LQ8N9Z2 235 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 NEURL3Q96EH8 262 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 FBXL20Q96IG2 436 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 MBD2Q9UBB5 411 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 SATB2Q9UPW6 733 aa12.47□□□□□ -0.41
PRPF38A-201ENST00000257181 A0A1B0GVC2 190 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 SNPHO15079 494 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 HRO43593 1189 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 CRYAAP02489 173 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 CTSLP07711 333 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 IVDP26440 423 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 CCNIQ14094 377 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 MAML2Q8IZL2 1156 aaPredicted RBP12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 SPERTQ8NA61 448 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF778Q96MU6 729 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 TUBA1CQ9BQE3 449 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 HIPK2Q9H2X6 1198 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 ANKRD65E5RJM6 399 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 UQCRC1P31930 480 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 KIR2DL1P43626 348 aaPredicted RBP12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 TMBIM6P55061 237 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 ERVK-16P61578 105 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 GRB7Q14451 532 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 EMC4Q5J8M3 183 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms