RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 RRAS2P62070 204 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 SUN5Q8TC36 379 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 ZNF431Q8TF32 576 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 CNOT9Q92600 299 aaKnown RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 RPP25Q9BUL9 199 aaKnown RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 PLA2G2FQ9BZM2 168 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 H0YGG7 62 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 P2RX6O15547 441 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 FGF17O60258 216 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 ZIC2O95409 532 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 UQCRC1P31930 480 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 GBX2P52951 348 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 ARF3P61204 181 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 HBMQ6B0K9 141 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 CDRT4Q8N9R6 151 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 OR6C4Q8NGE1 309 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 SENP5Q96HI0 755 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 CACNG6Q9BXT2 260 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 PIGUQ9H490 435 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 CLDND1Q9NY35 253 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 ACTR10Q9NZ32 417 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 A0A1W2PQ72 361 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 CTSVO60911 334 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 FCER2P06734 321 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 CFL1P23528 166 aaKnown RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 GIFP27352 417 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 C1orf61Q13536 156 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 GAB4Q2WGN9 574 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 ANKRD54Q6NXT1 300 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 FBXO42Q6P3S6 717 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 METAP1DQ6UB28 335 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 TMEM91Q6ZNR0 172 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 LRRC28Q86X40 367 aaPredicted RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 GPALPP1Q8IXQ4 340 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 OR8H3Q8N146 312 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 ZFYVE21Q9BQ24 234 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 CHIAQ9BZP6 476 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 SPATA2Q9UM82 520 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 TRBV2A0A0J9YWF9 115 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 FLRT2O43155 660 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 UGT2B7P16662 529 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 ODF4Q2M2E3 257 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 TAF8Q7Z7C8 310 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 METTL27Q8N6F8 245 aaPredicted RBP17.09■□□□□ 0.33
LRP3-201ENST00000253193 WDR92Q96MX6 357 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 FN3KQ9H479 309 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 GDE1Q9NZC3 331 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 SEC16AO15027 2179 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 BLOC1S5-TXNDC5H3BN57 136 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 NOS1APO75052 506 aaPredicted RBP17.09■□□□□ 0.33
LRP3-201ENST00000253193 FZD7O75084 574 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 SCO1O75880 301 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 THY1P04216 161 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 TRAPPC2P0DI81 140 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 TRAPPC2BP0DI82 140 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 CTSEP14091 401 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 STOMP27105 288 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 NTSR1P30989 418 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 SLC6A6P31641 620 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 PON3Q15166 354 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 FCN2Q15485 313 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 RTL4Q6ZR62 310 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 ZNF764Q96H86 408 aaPredicted RBP17.09■□□□□ 0.33
LRP3-201ENST00000253193 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 PPP1R3EQ9H7J1 279 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 TMEM5Q9Y2B1 443 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 SLC17A4Q9Y2C5 497 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 IER3IP1Q9Y5U9 82 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 RDH16O75452 317 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 SLC25A35Q3KQZ1 300 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 ARHGAP11BQ3KRB8 267 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 SFRP4Q6FHJ7 346 aaPredicted RBP17.09■□□□□ 0.33
LRP3-201ENST00000253193 SERPINA12Q8IW75 414 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 CSNK1A1LQ8N752 337 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 GALNT6Q8NCL4 622 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 ZNF559Q9BR84 538 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 MRPS2Q9Y399 296 aaKnown RBP17.09■□□□□ 0.33
LRP3-201ENST00000253193 CACNG2Q9Y698 323 aa17.09■□□□□ 0.33
LRP3-201ENST00000253193 LRRN3E7EW58 273 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 FABP7O15540 132 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 MTNR1BP49286 362 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 ADPRHP54922 357 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 GPR18Q14330 331 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 ZNF267Q14586 743 aaPredicted RBP17.08■□□□□ 0.33
LRP3-201ENST00000253193 C17orf47Q8NEP4 570 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 OR52R1Q8NGF1 315 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 ZFAND1Q8TCF1 268 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 ORAI1Q96D31 301 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 LRRN3Q9H3W5 708 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 KIR3DX1Q9H7L2 352 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 MRPS18AQ9NVS2 196 aaKnown RBP17.08■□□□□ 0.33
LRP3-201ENST00000253193 SLC35A3Q9Y2D2 325 aa17.08■□□□□ 0.33
LRP3-201ENST00000253193 NID1P14543 1247 aa17.08■□□□□ 0.32
LRP3-201ENST00000253193 OR3A3P47888 321 aa17.08■□□□□ 0.32
LRP3-201ENST00000253193 GZMKP49863 264 aa17.08■□□□□ 0.32
LRP3-201ENST00000253193 SNRPNP63162 240 aaKnown RBP17.08■□□□□ 0.32
LRP3-201ENST00000253193 PARM1Q6UWI2 310 aa17.08■□□□□ 0.32
LRP3-201ENST00000253193 OR5M3Q8NGP4 307 aa17.08■□□□□ 0.32
LRP3-201ENST00000253193 HSPA12BQ96MM6 686 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms