RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 GJE1A6NN92 205 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TMEM114B3SHH9 223 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 GOLGA8NF8WBI6 632 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 LYPLA1O75608 230 aaPredicted RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 H6PDO95479 791 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 YES1P07947 543 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 DDX5P17844 614 aaKnown RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 COX5AP20674 150 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 ENPP1P22413 925 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 EDNRAP25101 427 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 ALDH3A1P30838 453 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 RPL3P39023 403 aaKnown RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 OR3A2P47893 321 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 CCT3P49368 545 aaKnown RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 ATP12AP54707 1039 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 SELENBP1Q13228 472 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 SKP2Q13309 424 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TSC22D1Q15714 1073 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 NDUFAF6Q330K2 333 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TMEM176BQ3YBM2 270 aaPredicted RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 TMEM201Q5SNT2 666 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 C6orf136Q5SQH8 315 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 Q6ZT83 130 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 DDIASQ8IXT1 998 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 ZNF527Q8NB42 609 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TOR1AIP2Q8NFQ8 470 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 PIWIL2Q8TC59 973 aaKnown RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 FBXW5Q969U6 566 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 PPP3R2Q96LZ3 170 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 C3orf30Q96M34 536 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 PSD2Q9BQI7 771 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TACO1Q9BSH4 297 aaKnown RBP9.14□□□□□ -0.95
VPS50-201ENST00000251739 MECRQ9BV79 373 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 POTEKPQ9BYX7 375 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TRIM2Q9C040 744 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 NMUR2Q9GZQ4 415 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 HOXD1Q9GZZ0 328 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 ANKZF1Q9H8Y5 726 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 TIGARQ9NQ88 270 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 KCNE5Q9UJ90 142 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 LAMP3Q9UQV4 416 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 CARD8Q9Y2G2 431 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 DTNAQ9Y4J8 743 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 ELOA3CA0A087WX78 387 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 CENPVL1A0A0U1RR11 272 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 DPRXA6NFQ7 191 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SMIM23A6NLE4 172 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ELOA3DA6NLF2 546 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 H3BNH8 94 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SMAD9O15198 467 aaKnown RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 EIF4E2O60573 245 aaKnown RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 CYTIPO60759 359 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 CRLF1O75462 422 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SASH3O75995 380 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 PRKD3O94806 890 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 C6orf47O95873 294 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 KRT16P08779 473 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ATP6V1C1P21283 382 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 IL32P24001 234 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 MAPK1P28482 360 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 RAC3P60763 192 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 PPP2R2BQ00005 443 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 BSPH1Q075Z2 132 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ITGADQ13349 1161 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 TP53BP2Q13625 1128 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 PGGHGQ32M88 737 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ELOA3BQ3SY89 546 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ZNF672Q499Z4 452 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 AP1ARQ63HQ0 302 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SLC43A2Q8N370 569 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 KRTCAP2Q8N6L1 136 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 NATD1Q8N6N6 113 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 FAM71CQ8NEG0 241 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 KBTBD8Q8NFY9 601 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ELOA3Q8NG57 546 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 OR5W2Q8NH69 310 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ADAMTS15Q8TE58 950 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 UBLCP1Q8WVY7 318 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 HSD17B8Q92506 261 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ZNF75CPQ92670 426 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 NEUROG1Q92886 237 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 KISS1RQ969F8 398 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 MOAP1Q96BY2 351 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SDF2Q99470 211 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 C1orf50Q9BV19 199 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SLCO5A1Q9H2Y9 848 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 ESRP2Q9H6T0 727 aaKnown RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 ATAD3AQ9NVI7 634 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 KLHL9Q9P2J3 617 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 SLC17A7Q9P2U7 560 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 LGALS13Q9UHV8 139 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 MAGED1Q9Y5V3 778 aaPredicted RBP9.13□□□□□ -0.95
VPS50-201ENST00000251739 SNX8Q9Y5X2 465 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 MALRD1Q5VYJ5 2156 aa9.13□□□□□ -0.95
VPS50-201ENST00000251739 IGKV3D-15A0A087WSY6 115 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ZNF724A8MTY0 619 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms