RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DTX3Q8N9I9 347 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 CYB561A3Q8NBI2 242 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 OR5M3Q8NGP4 307 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 AHCYL2Q96HN2 611 aaKnown RBP13.3□□□□□ -0.28
HIF3A-202ENST00000244303 NDC1Q9BTX1 674 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 TWSG1Q9GZX9 223 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 SYNDIG1Q9H7V2 258 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 IL21RQ9HBE5 538 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 USP36Q9P275 1121 aaKnown RBP13.3□□□□□ -0.28
HIF3A-202ENST00000244303 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 CYR61O00622 381 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 FMO6PO60774 539 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 APBB3O95704 486 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 GPR75O95800 540 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 MT-ND5P03915 603 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 EIF4EP06730 217 aaKnown RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 F8A1P23610 371 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 HTR2BP41595 481 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 OR10A3P58181 314 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 POU6F2P78424 691 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 MRPS21P82921 87 aaKnown RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 SLC3A1Q07837 685 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 MGAT2Q10469 447 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 TMEM31Q5JXX7 168 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 ZNF614Q8N883 585 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 C4orf36Q96KX1 117 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 UBL7Q96S82 380 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 MARVELD1Q9BSK0 173 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 ADGRL4Q9HBW9 690 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 INPP5EQ9NRR6 644 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 TMEM5Q9Y2B1 443 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 SPACA6W5XKT8 324 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 J3QLW9 94 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 PLPP2O43688 288 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 PPP1R3DO95685 299 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 GYPBP06028 91 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 SBK2P0C263 348 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 ZNF19P17023 458 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 DRD1P21728 446 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 SLC2A5P22732 501 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 THBS2P35442 1172 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 MAP3K8P41279 467 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 TFF2Q03403 129 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 ZNF85Q03923 595 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 CRMP1Q14194 572 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 FAM209AQ5JX71 171 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 LRRC28Q86X40 367 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 TCTE3Q8IZS6 198 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 C17orf47Q8NEP4 570 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 OR4M1Q8NGD0 313 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 CNOT9Q92600 299 aaKnown RBP13.29□□□□□ -0.28
HIF3A-202ENST00000244303 HDHD2Q9H0R4 259 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 ENAMQ9NRM1 1142 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 CYSLTR2Q9NS75 346 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 KLHL21Q9UJP4 597 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 SLC35A3Q9Y2D2 325 aa13.29□□□□□ -0.28
HIF3A-202ENST00000244303 CEP290O15078 2479 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 RIIAD1A6NNX1 92 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 LANCL1O43813 399 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 PTP4A3O75365 173 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 HNRNPA2B1P22626 353 aaKnown RBP13.28□□□□□ -0.28
HIF3A-202ENST00000244303 LTBRP36941 435 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 OR12D2P58182 307 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 EFR3AQ14156 821 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 SFXN4Q6P4A7 337 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 ZCCHC12Q6PEW1 402 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 GPALPP1Q8IXQ4 340 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 SAMD12Q8N8I0 201 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 OR4C6Q8NH72 309 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 PTCHD1Q96NR3 888 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 GFM1Q96RP9 751 aaKnown RBP13.28□□□□□ -0.28
HIF3A-202ENST00000244303 TMEM27Q9HBJ8 222 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 STARD5Q9NSY2 213 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 ACOXLQ9NUZ1 547 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 FLRT3Q9NZU0 649 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 RASD1Q9Y272 281 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 A0A0B4J2E0 115 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 A0A1B0GX12 115 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 A6NIN4 97 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 ADAM11O75078 769 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 SLC43A1O75387 559 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 PAHP00439 452 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 AK1P00568 194 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 TFPIP10646 304 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 ZNF3P17036 446 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 DRD5P21918 477 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 ACVR1BP36896 505 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 TPMTP51580 245 aa13.28□□□□□ -0.28
HIF3A-202ENST00000244303 AGFG1P52594 562 aaKnown RBP13.28□□□□□ -0.28
HIF3A-202ENST00000244303 SRP54P61011 504 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms