RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 C9orf64Q5T6V5 341 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 PRAMEF13Q5VWM6 474 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 TMEM88Q6PEY1 159 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 C17orf64Q86WR6 236 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 OR2T4Q8NH00 348 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 CCDC107Q8WV48 283 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 MS4A3Q96HJ5 214 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 SAMD8Q96LT4 415 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 C20orf85Q9H1P6 137 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 MRPS18AQ9NVS2 196 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 A0A0B4J203 849 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 ZC3H12DA2A288 527 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 KDM4EB2RXH2 506 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 ARPC1BO15143 372 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 CREBL2O60519 120 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 UBL3O95164 117 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 C1orf105O95561 183 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 NTN1O95631 604 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 HPXP02790 462 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 NFYAP23511 347 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 S100PP25815 95 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 PYCR1P32322 319 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 KHKP50053 298 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 PRR5P85299 388 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 TNFRSF17Q02223 184 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 BAMBIQ13145 260 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 SLC25A35Q3KQZ1 300 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 CD300LDQ6UXZ3 194 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 TMEM173Q86WV6 379 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 APOBEC4Q8WW27 367 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 VPS25Q9BRG1 176 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 FAIM2Q9BWQ8 316 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 KIF25Q9UIL4 384 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 RCE1Q9Y256 329 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 ZNF593O00488 134 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 KHNYNO15037 678 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 SULT1A3P0DMM9 295 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 SULT1A4P0DMN0 295 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 HMGA1P17096 107 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 HTR1FP30939 366 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 IDH3GP51553 393 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 E2F1Q01094 437 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 TGM3Q08188 693 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 ACSM3Q53FZ2 586 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 PDSS1Q5T2R2 415 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 FAM83HQ6ZRV2 1179 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 SYT9Q86SS6 491 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 CMIPQ8IY22 773 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 LRRC56Q8IYG6 542 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 OR5T1Q8NG75 326 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 SORCS1Q8WY21 1168 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 HGDQ93099 445 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 TRMT61BQ9BVS5 477 aaKnown RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 MFFQ9GZY8 342 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 POMT2Q9UKY4 750 aa8.64□□□□□ -1.03
SRSF6-201ENST00000244020 COL4A4P53420 1690 aaPredicted RBP8.64□□□□□ -1.03
SRSF6-201ENST00000244020 EEF1E1-BLOC1S5C9J1V9 151 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ELFN1P0C7U0 828 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 UGT2B7P16662 529 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 GDNFP39905 211 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 SSR2P43308 183 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ZNF155Q12901 538 aaPredicted RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 IRF5Q13568 498 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 CLINT1Q14677 625 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 TIPARPQ7Z3E1 657 aaKnown RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 NR2C2APQ86WQ0 139 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 GJD3Q8N144 294 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 OR2L5Q8NG80 312 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 OR6K6Q8NGW6 343 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 BBS10Q8TAM1 723 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ABHD4Q8TB40 342 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 GLYATL1Q969I3 302 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 TOE1Q96GM8 510 aaKnown RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 UBL7Q96S82 380 aaPredicted RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 OR2AG1Q9H205 316 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 AUP1Q9Y679 476 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 FEZF1A0PJY2 475 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 GXYLT2A0PJZ3 443 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ATG12O94817 140 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 RPP14O95059 124 aaKnown RBP8.63□□□□□ -1.03
SRSF6-201ENST00000244020 RPN2P04844 631 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 CKBP12277 381 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 GLULP15104 373 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 NDUFV2P19404 249 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 BTCP35070 178 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 EPHB3P54753 998 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 PGGHGQ32M88 737 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ADAM5Q6NVV9 412 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 MORN4Q8NDC4 146 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 SUN3Q8TAQ9 357 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 HSD17B8Q92506 261 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 CXorf58Q96LI9 332 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 SEC22CQ9BRL7 303 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 SPG21Q9NZD8 308 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 TAC3Q9UHF0 121 aa8.63□□□□□ -1.03
SRSF6-201ENST00000244020 ICKQ9UPZ9 632 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms