RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMEM234Q8WY98 164 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 OR2B2Q9GZK3 357 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC6A15Q9H2J7 730 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 RPS6KB2Q9UBS0 482 aa24.7■■□□□ 1.54
CHMP4B-201ENST00000217402 FMO6PO60774 539 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 DIRAS1O95057 198 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 CRYABP02511 175 aaKnown RBP24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 POMZP3Q6PJE2 187 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 PHF10Q8WUB8 498 aaKnown RBP24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 ST8SIA1Q92185 356 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 ZDHHC11Q9H8X9 412 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 TMEM27Q9HBJ8 222 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 IL1RAPQ9NPH3 570 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 QPCTLQ9NXS2 382 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 NDUFAF4Q9P032 175 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 LIPGQ9Y5X9 500 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 ENPP4Q9Y6X5 453 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 SPTA1P02549 2419 aa24.69■■□□□ 1.54
CHMP4B-201ENST00000217402 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 A0A1B0GWA3 101 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 NPIPA5E9PKD4 350 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 RAP2AP10114 183 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC1A3P43003 542 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 TAS2R41P59536 307 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 PIN1Q13526 163 aaPredicted RBP24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC10A1Q14973 349 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 CMPK2Q5EBM0 449 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 LSMEM1Q8N8F7 131 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 ADAMTS16Q8TE57 1224 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 ZBTB8AQ96BR9 441 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 ACER3Q9NUN7 267 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 NPIPA1Q9UND3 350 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 WISP2O76076 250 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 MERTKQ12866 999 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 FOXD4Q12950 439 aaPredicted RBP24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 SIAH3Q8IW03 269 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 RNF217Q8TC41 542 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 POC1BQ8TC44 478 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 SLCO4A1Q96BD0 722 aa24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 ZNF300Q96RE9 604 aaPredicted RBP24.68■■□□□ 1.54
CHMP4B-201ENST00000217402 IGSF10Q6WRI0 2623 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 ENTPD5O75356 428 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 TACR3P29371 465 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 GRINAQ7Z429 371 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 SNRNP40Q96DI7 357 aaKnown RBP24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 MRGPRX4Q96LA9 322 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 PRRC1Q96M27 445 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 SFXN2Q96NB2 322 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 CHID1Q9BWS9 393 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 LDAHQ9H6V9 325 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 RHCGQ9UBD6 479 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC6A5Q9Y345 797 aa24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 MRPS18CQ9Y3D5 142 aaKnown RBP24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 FAM32AQ9Y421 112 aaKnown RBP24.67■■□□□ 1.54
CHMP4B-201ENST00000217402 TTLL8A6PVC2 850 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 ITGA2P17301 1181 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 IQCCQ4KMZ1 466 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 CYP4Z1Q86W10 505 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 GTPBP8Q8N3Z3 284 aaPredicted RBP24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 C3orf49Q96BT1 292 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 EXO5Q9H790 373 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 CCM2LQ9NUG4 571 aaPredicted RBP24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 A4GNTQ9UNA3 340 aa24.66■■□□□ 1.54
CHMP4B-201ENST00000217402 A0A0B4J2E0 115 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 A0A1B0GX12 115 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 OR2M5A3KFT3 312 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 FKBP6O75344 327 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 EIF1P41567 113 aaKnown RBP24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 MAGEA2P43356 314 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 CDH12P55289 794 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 B3GALT5-AS1P59052 145 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 ALG10BQ5I7T1 473 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 ZNF613Q6PF04 617 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 PYDC1Q8WXC3 89 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC41A3Q96GZ6 507 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 PIGQQ9BRB3 760 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 ACKR4Q9NPB9 350 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 SELENONQ9NZV5 590 aa24.65■■□□□ 1.54
CHMP4B-201ENST00000217402 C7orf72A4D263 438 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 TRAPPC13A5PLN9 417 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 ETV2O00321 342 aaPredicted RBP24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 FFAR1O14842 300 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 NTN1O95631 604 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 THY1P04216 161 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 ZNF17P17021 662 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 CCNA2P20248 432 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 IL11P20809 199 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 TMEM44Q2T9K0 475 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 GLYR1Q49A26 553 aaPredicted RBP24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC25A53Q5H9E4 307 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 NR4A3Q92570 626 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 RELTQ969Z4 430 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 ADAM19Q9H013 955 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 ASF1BQ9NVP2 202 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 RIMS3Q9UJD0 308 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 OSGIN1Q9UJX0 560 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 SLC7A7Q9UM01 511 aa24.64■■□□□ 1.54
CHMP4B-201ENST00000217402 RHCEP18577 417 aa24.64■■□□□ 1.53
CHMP4B-201ENST00000217402 SLC7A1P30825 629 aa24.64■■□□□ 1.53
CHMP4B-201ENST00000217402 POLR2HP52434 150 aaKnown RBP24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms