RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ELF4Q99607 663 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 SRA1Q9HD15 236 aaKnown RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 HRASLS2Q9NWW9 162 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 IER3IP1Q9Y5U9 82 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 TRIOBPQ9H2D6 2365 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 PKLRP30613 574 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 PPP3R1P63098 170 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 FOXK2Q01167 660 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 FAPQ12884 760 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 GPR18Q14330 331 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 SMAD2Q15796 467 aaKnown RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 C9orf50Q5SZB4 431 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 PXDC1Q5TGL8 231 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 ADAMTSL4Q6UY14 1074 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 RASSF6Q6ZTQ3 369 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 LINGO2Q7L985 606 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 PRR22Q8IZ63 422 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 RDH10Q8IZV5 341 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 ZNF511Q8NB15 262 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 RLN3Q8WXF3 142 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 FAM3CQ92520 227 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 DPCDQ9BVM2 203 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 SLA2Q9H6Q3 261 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 RBFOX1Q9NWB1 397 aaKnown RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 CLDND1Q9NY35 253 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 SLC23A1Q9UHI7 598 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 ACAD8Q9UKU7 415 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 LIPT1Q9Y234 373 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 A0A0A6YYC8 382 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 TVP23AA6NH52 213 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 I3L1I5 382 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 ZNF780AO75290 641 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 KLF8O95600 359 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 HOXB2P14652 356 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 EMDP50402 254 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 FXYD6P3P58550 94 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 ZNF267Q14586 743 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 DCST2Q5T1A1 773 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 SMPDL3BQ92485 455 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 NMNAT3Q96T66 252 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 TEAD3Q99594 435 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
EFNB1-201ENST00000204961 NARFLQ9H6Q4 476 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 ING3Q9NXR8 418 aa13.97□□□□□ -0.17
EFNB1-201ENST00000204961 A0A0A6YYJ9 748 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 CIB4A0PJX0 185 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 PRSS38A1L453 326 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 PCP4L1A6NKN8 68 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 H0YGG7 62 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 KHNYNO15037 678 aaKnown RBP13.96□□□□□ -0.17
EFNB1-201ENST00000204961 B3GALT2O43825 422 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 TLX1P31314 330 aaPredicted RBP13.96□□□□□ -0.17
EFNB1-201ENST00000204961 UBE2MP61081 183 aaKnown RBP13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ARF3P61204 181 aaPredicted RBP13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ERVK-21P61565 698 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ASAH1Q13510 395 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ELOAQ14241 798 aaKnown RBP13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ZMYND11Q15326 602 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 VASNQ6EMK4 673 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ANKRD54Q6NXT1 300 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 FIGLAQ6QHK4 219 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 GDPGP1Q6ZNW5 385 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ZPLD1Q8TCW7 415 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 ZNRF4Q8WWF5 429 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 SPACA7Q96KW9 195 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 MGAT4AQ9UM21 535 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 SLC27A6Q9Y2P4 619 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 OR10H1Q9Y4A9 318 aa13.96□□□□□ -0.17
EFNB1-201ENST00000204961 POU3F3P20264 500 aaPredicted RBP13.96□□□□□ -0.18
EFNB1-201ENST00000204961 COL9A1P20849 921 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 BMP8BP34820 402 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 ERVK-25P63136 954 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 RPA4Q13156 261 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 FAM53BQ14153 422 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 NDUFA9Q16795 377 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 EOGTQ5NDL2 527 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 MZT2AQ6P582 158 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 BMP8AQ7Z5Y6 402 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 RASD2Q96D21 266 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 SIPA1Q96FS4 1042 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 RNF170Q96K19 258 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 FUZQ9BT04 418 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 TAS2R7Q9NYW3 318 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 THAP10Q9P2Z0 257 aaPredicted RBP13.96□□□□□ -0.18
EFNB1-201ENST00000204961 CDH10Q9Y6N8 788 aa13.96□□□□□ -0.18
EFNB1-201ENST00000204961 FAM86C2PA6NEL3 165 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 RIIAD1A6NNX1 92 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ORC5O43913 435 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 SELENOFO60613 162 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ABATP80404 500 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ADAM15Q13444 863 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 GNA13Q14344 377 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ARHGAP19Q14CB8 494 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 SUZ12Q15022 739 aaKnown RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 MBOAT2Q6ZWT7 520 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 RANBP3LQ86VV4 465 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 OR52R1Q8NGF1 315 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 OR2L8Q8NGY9 312 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms